WormBase Tree Display for Gene: WBGene00001501
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| WBGene00001501 | SMap | S_parent | Sequence | D1037 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ftn-2 | |||||||
| Sequence_name | D1037.3 | ||||||||
| Molecular_name | D1037.3 | ||||||||
| D1037.3.1 | |||||||||
| CE20622 | |||||||||
| Other_name | CELE_D1037.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ftn-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ftn | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00002965 | ||||||||
| WBStrain00031408 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (74) | |||||||||
| Paralog | WBGene00001500 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ftn-2 encodes one of two C. elegans ferritin heavy chain homologs; loss of ftn-2 activity via deletion mutation results in slightly lower brood sizes and, under iron stress conditions, slightly faster growth from the L4 to adult stage of development, and slightly reduced lifespan; an ftn-2::gfp reporter fusion is expressed in diverse tissues, including the pharynx, intestine, and hypodermis, and its expression, along with that of ftn-2 mRNA, does not appear to change significantly under iron stress conditions. | Paper_evidence | WBPaper00005703 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00024456 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 10 Mar 2006 00:00:00 | ||||||||
| Automated_description | Enables identical protein binding activity. Involved in defense response to Gram-positive bacterium. Predicted to be located in cytoplasm. Expressed in body wall musculature and hypodermis. Human ortholog(s) of this gene implicated in several diseases, including hemochromatosis type 5; hyperferritinemia-cataract syndrome; and neurodegeneration with brain iron accumulation 3. Is an ortholog of human FTMT (ferritin mitochondrial). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||
| DOID:1289 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||||
| DOID:0111031 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3976) | ||||||
| DOID:0080600 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3976,HGNC:3999) | ||||||
| DOID:0110737 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||||
| DOID:679 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||||
| Molecular_info | Corresponding_CDS | D1037.3 | |||||||
| Corresponding_transcript | D1037.3.1 | ||||||||
| Other_sequence | EL887715.1 | ||||||||
| CBC10112_1 | |||||||||
| EX911069.1 | |||||||||
| MJ00925 | |||||||||
| ES410037.1 | |||||||||
| AYC00089_2 | |||||||||
| ES563591.1 | |||||||||
| HBC18054_1 | |||||||||
| ES742853.1 | |||||||||
| TDC01809_1 | |||||||||
| Hbac_isotig01033 | |||||||||
| EX013124.1 | |||||||||
| EX008877.1 | |||||||||
| EX013638.1 | |||||||||
| CR01087 | |||||||||
| Tcol_isotig03912 | |||||||||
| EX913831.1 | |||||||||
| EX011809.1 | |||||||||
| ZPC00072_1 | |||||||||
| Acan_isotig11816 | |||||||||
| FD514555.1 | |||||||||
| EX544096.1 | |||||||||
| ES564490.1 | |||||||||
| LSC00687_1 | |||||||||
| EX013228.1 | |||||||||
| PE00357 | |||||||||
| Tcol_isotig03911 | |||||||||
| CB036805.1 | |||||||||
| AYC00089_1 | |||||||||
| RSC01269_1 | |||||||||
| EX011225.1 | |||||||||
| EX913122.1 | |||||||||
| DA00225 | |||||||||
| HC04904 | |||||||||
| EX912681.1 | |||||||||
| FC546408.1 | |||||||||
| EX916455.1 | |||||||||
| PPC00159_1 | |||||||||
| RSC00164_1 | |||||||||
| Tcol_isotig03913 | |||||||||
| AE01308 | |||||||||
| ES411750.1 | |||||||||
| CJC05746_1 | |||||||||
| TSC02405_1 | |||||||||
| EX010915.1 | |||||||||
| GW412852.1 | |||||||||
| EX009542.1 | |||||||||
| ES740145.1 | |||||||||
| GO238935.1 | |||||||||
| FD514557.1 | |||||||||
| ES412962.1 | |||||||||
| XIC00760_1 | |||||||||
| Acan_contig07264 | |||||||||
| EY460591.1 | |||||||||
| FC554818.1 | |||||||||
| PEC00395_1 | |||||||||
| ACC10143_1 | |||||||||
| HG09170 | |||||||||
| ES409702.1 | |||||||||
| GO250173.1 | |||||||||
| RS07301 | |||||||||
| Tcir_isotig03132 | |||||||||
| BXC04872_1 | |||||||||
| ES741627.1 | |||||||||
| CSC00631_1 | |||||||||
| XI03054 | |||||||||
| Name_isotig02022 | |||||||||
| PVC01087_1 | |||||||||
| FD517063.1 | |||||||||
| GP02922 | |||||||||
| EY466651.1 | |||||||||
| OOC02320_1 | |||||||||
| EX010779.1 | |||||||||
| ACC07738_1 | |||||||||
| EX007880.1 | |||||||||
| FD516633.1 | |||||||||
| HGC02584_1 | |||||||||
| CRC03595_1 | |||||||||
| GPC01477_1 | |||||||||
| DN557543.1 | |||||||||
| HGC06193_1 | |||||||||
| DN557604.1 | |||||||||
| ES291034.1 | |||||||||
| HG03372 | |||||||||
| BUC00387_1 | |||||||||
| PPC16612_1 | |||||||||
| GO252030.1 | |||||||||
| MHC08568_1 | |||||||||
| AS01507 | |||||||||
| HCC01982_1 | |||||||||
| HC04479 | |||||||||
| XIC02420_1 | |||||||||
| Dviv_isotig28567 | |||||||||
| MJC00448_1 | |||||||||
| PSC03125_1 | |||||||||
| EX014348.1 | |||||||||
| BMC06485_1 | |||||||||
| EX013863.1 | |||||||||
| ES743543.1 | |||||||||
| MH10214 | |||||||||
| XI03413 | |||||||||
| AS16792 | |||||||||
| TS03418 | |||||||||
| ES410324.1 | |||||||||
| ES741097.1 | |||||||||
| GO249646.1 | |||||||||
| EX009226.1 | |||||||||
| EX009470.1 | |||||||||
| RS05914 | |||||||||
| XI01112 | |||||||||
| ES743847.1 | |||||||||
| CR09341 | |||||||||
| EX910642.1 | |||||||||
| Oden_isotig22702 | |||||||||
| CV200280.1 | |||||||||
| Acan_isotig07186 | |||||||||
| PP00481 | |||||||||
| Tcir_isotig28178 | |||||||||
| JI178454.1 | |||||||||
| EX015128.1 | |||||||||
| DAC01922_1 | |||||||||
| XIC03001_1 | |||||||||
| HCC02904_1 | |||||||||
| ZP00142 | |||||||||
| EX014610.1 | |||||||||
| EX912314.1 | |||||||||
| EX007629.1 | |||||||||
| Tcir_isotig03131 | |||||||||
| FM207815.1 | |||||||||
| EX914246.1 | |||||||||
| EX539578.1 | |||||||||
| Tcir_isotig31425 | |||||||||
| AE00093 | |||||||||
| ASC21266_1 | |||||||||
| ES742830.1 | |||||||||
| FD514558.1 | |||||||||
| CBC01577_1 | |||||||||
| HC02077 | |||||||||
| EX913699.1 | |||||||||
| ACC00325_1 | |||||||||
| FD514955.1 | |||||||||
| EX544353.1 | |||||||||
| GRC00729_1 | |||||||||
| FD516347.1 | |||||||||
| EX915269.1 | |||||||||
| HBC00323_1 | |||||||||
| CJC00088_1 | |||||||||
| GO249214.1 | |||||||||
| HBC01507_1 | |||||||||
| AE00955 | |||||||||
| EX910881.1 | |||||||||
| EX013952.1 | |||||||||
| ES410084.1 | |||||||||
| ACC26993_1 | |||||||||
| PPC08273_1 | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089360 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102059 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033297 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102060 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003267 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043364 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067721 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089349 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1229 | ||||||||
| Expr3081 | |||||||||
| Expr4744 | |||||||||
| Expr5610 | |||||||||
| Expr7855 | |||||||||
| Expr1022759 | |||||||||
| Expr1030901 | |||||||||
| Expr1147349 | |||||||||
| Expr2011914 | |||||||||
| Expr2030151 | |||||||||
| Drives_construct | WBCnstr00003471 | ||||||||
| WBCnstr00009029 | |||||||||
| WBCnstr00011121 | |||||||||
| WBCnstr00012954 | |||||||||
| WBCnstr00016205 | |||||||||
| WBCnstr00036907 | |||||||||
| Construct_product | WBCnstr00011121 | ||||||||
| WBCnstr00036907 | |||||||||
| Antibody | WBAntibody00002946 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (215) | |||||||||
| Interaction (202) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| WBbiopr:00000096 | |||||||||
| Map_info | Map | I | Position | -2.93309 | Error | 0.018064 | |||
| Positive | Positive_clone | D1037 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4327 | |||||||
| 4429 | |||||||||
| 4670 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (21) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
