WormBase Tree Display for Gene: WBGene00001481

WBGene00001481 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y54E10A
  Identity: Version: 1
    Name: CGC_name: fog-1 Person_evidence: WBPerson261
      Sequence_name: Y54E10A.4
      Molecular_name (13)
      Other_name: cpb-4
        CELE_Y54E10A.4 Accession_evidence: NDB BX284601
      Public_name: fog-1
    DB_info: Database: AceView gene 1D785
        WormQTL gene WBGene00001481
        WormFlux gene WBGene00001481
        NDB locus_tag CELE_Y54E10A.4
        Panther gene CAEEL|WormBase=WBGene00001481|UniProtKB=G5EBS6
          family PTHR12566
        NCBI gene 171895
        RefSeq protein NM_001313541.3
            NM_001313540.3
            NM_001381585.1
            NM_001381586.3
        TREEFAM TREEFAM_ID TF317658
        TrEMBL UniProtAcc A0A0K3ATT1
            G5EBS6
            Q95XX9
            A0A0K3AQU4
        UniProt_GCRP UniProtAcc G5EBS6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: Y54E10A.4a
      Y54E10A.4b
      Y54E10A.4c
      Y54E10A.4d
    Corresponding_transcript: Y54E10A.4a.1
      Y54E10A.4a.2
      Y54E10A.4b.1
      Y54E10A.4c.1
      Y54E10A.4d.1
    Other_sequence: CRC04533_1
      MH07524
    Associated_feature: WBsf028075
      WBsf643133
      WBsf656105
      WBsf656106
      WBsf217376
      WBsf217377
  Experimental_info: RNAi_result (15)
    Expr_pattern (11)
    Construct_product: WBCnstr00022307
    Regulate_expr_cluster: WBPaper00048762:FOG-1_associated
    Antibody: WBAntibody00000874
      WBAntibody00000966
    Microarray_results (27)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00040209:B.thuringiensis_upregulated_MY18
      WBPaper00040990:PA14_downregulated
      WBPaper00041071:spe-44_upregulated
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045017:blmp-1(tm548)_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00045729:gld-2(RNAi)_downregulated
      WBPaper00048762:FOG-1_associated
      WBPaper00048762:FOG-3_associated
      WBPaper00048926:miaserin_upregulated_adult-day10
      WBPaper00048988:neuron_expressed
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050522:mafr-1(tm6082)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051404:alg-1(gk214)_upregulated
      WBPaper00051404:alg-2(ok304)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053302:alovudine_24h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053318:Aging_upregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_upregulated_mRNA
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00054792:FOG-3_interacting
      WBPaper00055103:thoc-5(wy822)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056039:ptrn-1(tm5597)_upregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057154:HeatShock_downregulated_mRNA
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061274:microgravity_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:mlt-9_22518-F33D4.6_14044
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00061699:daf-18(ok480)_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_upregulated
      WBPaper00062497:xpf-1(tm2842)_downregulated
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065215:microgravity_upregulated_DESeq2
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_5_4
      cgc4489_group_20
      WBPaper00025032:cluster_35
      WBPaper00029437:dcr-1_downregulated
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00037113:CPF_16C_up-regulated
      WBPaper00037611:GLD-2-associated
      WBPaper00037611:RNP-8-associated
      WBPaper00037695:LD_3-day
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041002:HF_11d_2.0mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00042258:DA1877_downregulated_GravidAdult
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    Interaction (73)
  Map_info: Map: I Position: -4.47297 Error: 0.001409
    Well_ordered
    Positive: Positive_clone: Y54E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Outside_rearr: sDf4
    Mapping_data: 2_point: 2502
      Multi_point (19)
      Pos_neg_data: 3183
        8068
        5693
        6211
        6228
        6566
        6627
        8064
        8533
  Reference: WBPaper00001013
    WBPaper00001037
    WBPaper00001075
    WBPaper00001112
    WBPaper00001206
    WBPaper00001242
    WBPaper00001270
    WBPaper00001554
    WBPaper00001560
    WBPaper00001609
    WBPaper00001629
    WBPaper00001683
    WBPaper00001710
    WBPaper00001824
    WBPaper00001833
    WBPaper00001883
    WBPaper00001898
    WBPaper00001966
    WBPaper00001982
    WBPaper00002009
    WBPaper00002112
    WBPaper00002610
    WBPaper00002631
    WBPaper00002644
    WBPaper00002649
    WBPaper00002662
    WBPaper00002933
    WBPaper00003279
    WBPaper00003371
    WBPaper00003372
    WBPaper00003451
    WBPaper00003933
    WBPaper00004256
    WBPaper00004396
    WBPaper00004527
    WBPaper00005045
    WBPaper00005065
    WBPaper00005379
    WBPaper00005425
    WBPaper00005549
    WBPaper00005566
    WBPaper00006019
    WBPaper00010206
    WBPaper00010860
    WBPaper00012444
    WBPaper00012445
    WBPaper00012610
    WBPaper00012641
    WBPaper00012682
    WBPaper00012732
    WBPaper00013707
    WBPaper00013914
    WBPaper00014079
    WBPaper00014441
    WBPaper00014844
    WBPaper00014924
    WBPaper00015240
    WBPaper00015489
    WBPaper00015490
    WBPaper00015778
    WBPaper00016427
    WBPaper00016543
    WBPaper00018416
    WBPaper00018650
    WBPaper00018715
    WBPaper00018734
    WBPaper00019647
    WBPaper00021755
    WBPaper00021936
    WBPaper00021937
    WBPaper00022113
    WBPaper00022404
    WBPaper00022405
    WBPaper00022882
    WBPaper00022892
    WBPaper00023046
    WBPaper00023240
    WBPaper00023272
    WBPaper00023274
    WBPaper00023295
    WBPaper00023306
    WBPaper00023371
    WBPaper00024229
    WBPaper00024428
    WBPaper00025000
    WBPaper00026241
    WBPaper00026645
    WBPaper00026678
    WBPaper00027025
    WBPaper00027224
    WBPaper00027248
    WBPaper00027281
    WBPaper00027294
    WBPaper00027955
    WBPaper00027960
    WBPaper00029084
    WBPaper00029090
    WBPaper00029395
    WBPaper00030414
    WBPaper00031972
    WBPaper00032220
    WBPaper00032406
    WBPaper00032481
    WBPaper00033926
    WBPaper00034356
    WBPaper00034647
    WBPaper00034949
    WBPaper00035521
    WBPaper00035609
    WBPaper00036244
    WBPaper00038491
    WBPaper00038810
    WBPaper00039575
    WBPaper00039600
    WBPaper00039617
    WBPaper00040947
    WBPaper00041071
    WBPaper00043722
    WBPaper00043724
    WBPaper00043731
    WBPaper00045597
    WBPaper00048234
    WBPaper00048418
    WBPaper00048762
    WBPaper00052848
    WBPaper00053705
    WBPaper00055090
    WBPaper00055155
    WBPaper00057903
    WBPaper00059332
    WBPaper00060545
    WBPaper00061123
    WBPaper00061440
    WBPaper00062496
    WBPaper00063106
    WBPaper00063267
    WBPaper00063338
    WBPaper00064734
    WBPaper00065228
    WBPaper00065388
    WBPaper00065711
  Picture: WBPicture0000013095
  Method: Gene