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WormBase Tree Display for Gene: WBGene00001391

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Name Class

WBGene00001391EvidencePaper_evidenceWBPaper00005754
SMapS_parentSequenceK01A2
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classfar
Allele (36)
RNASeq_FPKM (74)
GO_annotation00097816
00097817
00108648
OrthologWBGene00064701Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00029218Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00154496Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223407Brugia malayiFrom_analysisWormBase-Compara
CSP26.g21308Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18317Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17508Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25612Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g879Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8453Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24380Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22506Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00563.g12267Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-far-7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5613Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00467.g11752Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14347Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008135Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g5797Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g5798Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20067300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g3089Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245563Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00100052Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263105Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00001385Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001386Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001387Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001388Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001389Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001390Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015578Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001392Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnables oleic acid binding activity. Located in cytoplasm. Expressed in excretory canal; excretory cell; hypodermis; and in male.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK01A2.2a
K01A2.2b
K01A2.2d
Corresponding_CDS_historyK01A2.2b:wp248
Corresponding_transcriptK01A2.2c
K01A2.2a.1
K01A2.2b.1
K01A2.2d.1
Other_sequence (17)
Associated_featureWBsf220748
Experimental_infoRNAi_resultWBRNAi00016368Inferred_automaticallyRNAi_primary
WBRNAi00033804Inferred_automaticallyRNAi_primary
WBRNAi00049587Inferred_automaticallyRNAi_primary
Expr_patternExpr2397
Expr8827
Expr1010265
Expr1153315
Expr2011426
Expr2029664
Drives_constructWBCnstr00013548
Construct_productWBCnstr00013548
Microarray_results (26)
Expression_cluster (301)
Interaction (249)
WBProcessWBbiopr:00000121
Map_infoMapIIPosition-15.627Error0.000826
PositivePositive_cloneK01A2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005754
WBPaper00006465
WBPaper00027365
WBPaper00035306
WBPaper00040135
WBPaper00048498
WBPaper00060399
WBPaper00064370
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene