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WormBase Tree Display for Gene: WBGene00001247

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Name Class

WBGene00001247SMapS_parentSequenceY53F4B
IdentityVersion1
NameCGC_nameelo-9Person_evidenceWBPerson79
Sequence_nameY53F4B.2
Molecular_nameY53F4B.2
Y53F4B.2.1
CE22388
Other_nameCELE_Y53F4B.2Accession_evidenceNDBBX284602
Public_nameelo-9
DB_infoDatabaseAceViewgene2P242
WormQTLgeneWBGene00001247
WormFluxgeneWBGene00001247
NDBlocus_tagCELE_Y53F4B.2
PanthergeneCAEEL|WormBase=WBGene00001247|UniProtKB=Q9NAC6
familyPTHR11157
NCBIgene190207
RefSeqproteinNM_064685.3
TREEFAMTREEFAM_IDTF106467
TrEMBLUniProtAccQ9NAC6
UniProt_GCRPUniProtAccQ9NAC6
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelo
Allele (96)
StrainWBStrain00031753
RNASeq_FPKM (74)
GO_annotation (20)
OrthologWBGene00054467Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00039802Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00139292Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00127035Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00163367Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00157171Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00162343Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151065Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00157116Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00143246Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00163069Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00162438Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00183545Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00136020Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00136264Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00135035Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00175438Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00216714Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00070277Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00070278Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00083418Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069555Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064002Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064003Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00138707Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00131995Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00093215Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00093212Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00100503Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00227013Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g6337Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11156Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11215Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14687Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9759Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27179Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3658Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14333Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16579Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16599Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26964Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5710Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00236.g7597Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-elo-9Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6838Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold581.g4567Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_09817Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006638Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08791Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4357Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20057300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6632Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247965Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248003Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00100505Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00205249Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272331Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279145Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279448Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279956Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259048Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265708Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294083Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004364Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoFinder
OrthoInspector
SonicParanoid
SGD:S000003732Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoFinder
OrthoInspector
SonicParanoid
FB:FBgn0260960Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
Panther
PhylomeDB
ZFIN:ZDB-GENE-030114-1Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
ZFIN:ZDB-GENE-040718-309Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
ZFIN:ZDB-GENE-031110-3Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
HGNC:15829Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
HGNC:18047Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
MGI:2156528Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
RGD:620585Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
RGD:1307263Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
OrthoInspector
Panther
ParalogWBGene00001239Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001240Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001241Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001242Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001243Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001244Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001245Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001246Caenorhabditis elegansFrom_analysisTreeFam
Panther
Structured_descriptionConcise_descriptionThe elo-9 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; elo-9 has no known function in vivo.Paper_evidenceWBPaper00004162
WBPaper00005728
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to be located in membrane. Is an ortholog of human ELOVL3 (ELOVL fatty acid elongase 3) and ELOVL6 (ELOVL fatty acid elongase 6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY53F4B.2
Corresponding_transcriptY53F4B.2.1
Other_sequence (61)
Associated_featureWBsf650770
WBsf666412
WBsf666413
WBsf717047
WBsf717843
WBsf717844
WBsf224312
Experimental_infoRNAi_resultWBRNAi00057273Inferred_automaticallyRNAi_primary
WBRNAi00022964Inferred_automaticallyRNAi_primary
WBRNAi00102640Inferred_automaticallyRNAi_primary
WBRNAi00037418Inferred_automaticallyRNAi_primary
WBRNAi00020919Inferred_automaticallyRNAi_primary
Expr_patternExpr1023689
Expr1030790
Expr1160711
Expr2011286
Expr2029522
Drives_constructWBCnstr00037013
Construct_productWBCnstr00037013
Microarray_results (18)
Expression_cluster (154)
InteractionWBInteraction000463245
WBInteraction000465045
WBInteraction000465046
Map_infoMapIIPosition23.7988Error0.020035
PositivePositive_cloneY53F4BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5524
Pseudo_map_position
ReferenceWBPaper00029292
WBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00064105
WBPaper00065988
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene