WormBase Tree Display for Gene: WBGene00001214
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| WBGene00001214 | SMap | S_parent | Sequence | F26A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ego-1 | Person_evidence | WBPerson398 | |||||
| Sequence_name | F26A3.3 | ||||||||
| Molecular_name | F26A3.3 | ||||||||
| F26A3.3.1 | |||||||||
| CE27140 | |||||||||
| Other_name | ego-6 | Paper_evidence | WBPaper00023654 | ||||||
| Person_evidence | WBPerson398 | ||||||||
| CELE_F26A3.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | ego-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ego | ||||||||
| Allele (67) | |||||||||
| Legacy_information | [Maine EM] ego for Enhancer of Glp-One (glp-1). om18 is recessive enhancer of glp-1(bn18) at 20C, has reduced germ cell number, 50% of wild type in young adult, delayed spermatogenesis, abnormal unfertilized oocytes. | ||||||||
| [C.elegansII] om18 : recessive enhancer of glp-1(bn18) at 20C; has reduced germ cell number, 50% of wild type in young adult, delayed spermatogenesis, abnormal unfertilized oocytes. NA1. [Qiao et al. 1995; EL] | |||||||||
| Strain | WBStrain00040471 | ||||||||
| WBStrain00006416 | |||||||||
| WBStrain00006425 | |||||||||
| WBStrain00006418 | |||||||||
| WBStrain00006422 | |||||||||
| WBStrain00007147 | |||||||||
| WBStrain00007149 | |||||||||
| WBStrain00007150 | |||||||||
| WBStrain00054544 | |||||||||
| WBStrain00055737 | |||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Contained_in_operon | CEOP1412 | ||||||||
| Ortholog (56) | |||||||||
| Paralog | WBGene00004510 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004508 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004509 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ego-1 encodes a homolog of RNA-directed RNA polymerase; ego-1 is essential for several aspects of germline development such as proliferation, heterochromatin assembly on unpaired DNA during meiosis, and gametogenesis; ego-1 is also required for RNAi in the germ line; EGO-1 is detected in nuclear extracts. | Paper_evidence | WBPaper00002279 | |||||
| WBPaper00004137 | |||||||||
| WBPaper00025208 | |||||||||
| WBPaper00026940 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 31 Aug 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA-dependent RNA polymerase activity. Involved in gamete generation; nuclear pore localization; and regulatory ncRNA-mediated post-transcriptional gene silencing. Located in P granule; condensed nuclear chromosome; and metaphase plate. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F26A3.3 | |||||||
| Corresponding_CDS_history | F26A3.3:wp47 | ||||||||
| Corresponding_transcript | F26A3.3.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf664469 | ||||||||
| WBsf219796 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00014704 | ||||||||
| WBCnstr00019235 | |||||||||
| WBCnstr00019236 | |||||||||
| WBCnstr00037029 | |||||||||
| Construct_product | WBCnstr00014704 | ||||||||
| WBCnstr00019236 | |||||||||
| WBCnstr00037029 | |||||||||
| Antibody | WBAntibody00000957 | ||||||||
| WBAntibody00002001 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (37) | |||||||||
| WBProcess | WBbiopr:00000057 | ||||||||
| Map_info | Map | I | Position | 2.21303 | Error | 0.00316 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F26A3 | Person_evidence | WBPerson398 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 3349 | |||||||
| 3350 | |||||||||
| 3351 | |||||||||
| 3352 | |||||||||
| 3353 | |||||||||
| 4644 | |||||||||
| Reference (87) | |||||||||
| Remark | data extracted from letter, WBG 13-4:41. | ||||||||
| Method | Gene |
