WormBase Tree Display for Gene: WBGene00001188
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| WBGene00001188 | SMap | S_parent | Sequence | W08D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | egl-20 | Person_evidence | WBPerson268 | |||||
| Sequence_name | W08D2.1 | ||||||||
| Molecular_name | W08D2.1 | ||||||||
| W08D2.1.1 | |||||||||
| CE25152 | |||||||||
| W08D2.1.2 | |||||||||
| W08D2.1.3 | |||||||||
| Other_name | CELE_W08D2.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | egl-20 | ||||||||
| DB_info | Database | AceView | gene | 4K578 | |||||
| WormQTL | gene | WBGene00001188 | |||||||
| SignaLink | protein | WBGene00001188 | |||||||
| WormFlux | gene | WBGene00001188 | |||||||
| NDB | locus_tag | CELE_W08D2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001188|UniProtKB=G5EG05 | |||||||
| family | PTHR12027 | ||||||||
| NCBI | gene | 177821 | |||||||
| RefSeq | protein | NM_001380420.2 | |||||||
| TrEMBL | UniProtAcc | G5EG05 | |||||||
| UniProt_GCRP | UniProtAcc | G5EG05 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egl | ||||||||
| Reference_allele | WBVar00089611 | ||||||||
| Allele (65) | |||||||||
| Possibly_affected_by | WBVar02152830 | ||||||||
| Legacy_information | n585ts : moderate bloating at 25x Type E. ES3 (adult). NA1. | ||||||||
| [C.elegansII] n585ts : moderate bloating at 25C, variable drug response; pleiotropic Mig, some but not all migrations defective, QL daughters migrate anteriorly.ES3 (adult). ME0 (variable Mab: blobby rays, small fan, displaced sex muscles etc.).NA1. [Trent et al. 1983; Garriga and Stern 1994; CF; MT] | |||||||||
| Strain (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (70) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00000857 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000858 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003029 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003395 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables receptor tyrosine kinase binding activity. Involved in several processes, including left/right axis specification; neuron migration; and regulation of locomotion. Located in extracellular space. Expressed in several structures, including body wall muscle cell from C lineage; intestinal muscle; neuroblasts; rectal epithelial cell; and somatic nervous system. Is an ortholog of human WNT16 (Wnt family member 16). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08D2.1 | |||||||
| Corresponding_transcript | W08D2.1.1 | ||||||||
| W08D2.1.2 | |||||||||
| W08D2.1.3 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf718162 | ||||||||
| WBsf997481 | |||||||||
| WBsf1018003 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern (19) | |||||||||
| Drives_construct (33) | |||||||||
| Construct_product (21) | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (133) | |||||||||
| WBProcess | WBbiopr:00000023 | ||||||||
| WBbiopr:00000073 | |||||||||
| WBbiopr:00000082 | |||||||||
| Map_info | Map | IV | Position | 4.42274 | Error | 0.000639 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | W08D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 729 | |||||||
| Multi_point (11) | |||||||||
| Pos_neg_data | 5746 | ||||||||
| 6020 | |||||||||
| 6021 | |||||||||
| 6022 | |||||||||
| Reference (200) | |||||||||
| Picture | WBPicture0000013083 | ||||||||
| Method | Gene |
