WormBase Tree Display for Gene: WBGene00001148
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| WBGene00001148 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | eat-20 | Person_evidence | WBPerson32 | |||||
| Sequence_name | H30A04.1 | ||||||||
| Molecular_name | H30A04.1a | ||||||||
| H30A04.1a.1 | |||||||||
| CE18828 | |||||||||
| H30A04.1b | |||||||||
| CE27767 | |||||||||
| H30A04.1a.2 | |||||||||
| H30A04.1b.1 | |||||||||
| H30A04.1c | |||||||||
| Other_name | eat-20a | Paper_evidence | WBPaper00003907 | ||||||
| Accession_evidence | EMBL | AB032748 | |||||||
| eat-20b | Paper_evidence | WBPaper00003907 | |||||||
| Accession_evidence | EMBL | AB032749 | |||||||
| crl-1 | |||||||||
| CELE_H30A04.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | eat-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eat | ||||||||
| Allele (302) | |||||||||
| Strain | WBStrain00034491 | ||||||||
| WBStrain00034469 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00096748 | ||||||||
| 00096749 | |||||||||
| 00096750 | |||||||||
| 00096751 | |||||||||
| 00108321 | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00000185 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001609 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004963 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019901 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018041 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012917 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021400 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Located in axon and cell surface. Expressed in several structures, including anterior ganglion (post); coelomocyte; pharynx; ray neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H30A04.1a | |||||||
| H30A04.1b | |||||||||
| Corresponding_CDS_history | H30A04.1:wp51 | ||||||||
| Corresponding_transcript | H30A04.1c | ||||||||
| H30A04.1a.1 | |||||||||
| H30A04.1a.2 | |||||||||
| H30A04.1b.1 | |||||||||
| Corresponding_pseudogene_history | H30A04.1c:wp122 | ||||||||
| Other_sequence (32) | |||||||||
| Associated_feature (20) | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr976 | ||||||||
| Expr977 | |||||||||
| Expr1801 | |||||||||
| Expr2251 | |||||||||
| Expr1020145 | |||||||||
| Expr1030729 | |||||||||
| Expr1153240 | |||||||||
| Expr2011155 | |||||||||
| Expr2029391 | |||||||||
| Drives_construct | WBCnstr00001239 | ||||||||
| WBCnstr00007243 | |||||||||
| WBCnstr00010459 | |||||||||
| WBCnstr00037066 | |||||||||
| Construct_product | WBCnstr00010459 | ||||||||
| WBCnstr00037066 | |||||||||
| Antibody | WBAntibody00000267 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | X | Position | 22.8101 | Error | 0.013177 | |||
| Positive | Positive_clone | H30A04 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4273 | |||||||
| 4927 | |||||||||
| 5530 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | cgc3907 and embl mRNA for sequence connection. from dl1 010517 | ||||||||
| Sequence connection from [Bossinger O] | |||||||||
| Sequence connection from [Shibata Y, Takagi S, Dent J] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
