WormBase Tree Display for Gene: WBGene00001148
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WBGene00001148 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | eat | ||||||
Allele (302) | |||||||
Strain | WBStrain00034491 | ||||||
WBStrain00034469 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00096748 | ||||||
00096749 | |||||||
00096750 | |||||||
00096751 | |||||||
00108321 | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00000185 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00001609 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004963 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019901 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018041 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012917 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021400 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Located in axon and cell surface. Expressed in several structures, including anterior ganglion (post); coelomocyte; pharynx; ray neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | H30A04.1a | |||||
H30A04.1b | |||||||
Corresponding_CDS_history | H30A04.1:wp51 | ||||||
Corresponding_transcript | H30A04.1c | ||||||
H30A04.1a.1 | |||||||
H30A04.1a.2 | |||||||
H30A04.1b.1 | |||||||
Corresponding_pseudogene_history | H30A04.1c:wp122 | ||||||
Other_sequence (32) | |||||||
Associated_feature (20) | |||||||
Experimental_info | RNAi_result (13) | ||||||
Expr_pattern | Expr976 | ||||||
Expr977 | |||||||
Expr1801 | |||||||
Expr2251 | |||||||
Expr1020145 | |||||||
Expr1030729 | |||||||
Expr1153240 | |||||||
Expr2011155 | |||||||
Expr2029391 | |||||||
Drives_construct | WBCnstr00001239 | ||||||
WBCnstr00007243 | |||||||
WBCnstr00010459 | |||||||
WBCnstr00037066 | |||||||
Construct_product | WBCnstr00010459 | ||||||
WBCnstr00037066 | |||||||
Antibody | WBAntibody00000267 | ||||||
Microarray_results (26) | |||||||
Expression_cluster (135) | |||||||
Interaction (18) | |||||||
Map_info | Map | X | Position | 22.8101 | Error | 0.013177 | |
Positive | Positive_clone | H30A04 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4273 | |||||
4927 | |||||||
5530 | |||||||
Pseudo_map_position | |||||||
Reference (13) | |||||||
Remark | cgc3907 and embl mRNA for sequence connection. from dl1 010517 | ||||||
Sequence connection from [Bossinger O] | |||||||
Sequence connection from [Shibata Y, Takagi S, Dent J] | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |