WormBase Tree Display for Gene: WBGene00001007
expand all nodes | collapse all nodes | view schema
| WBGene00001007 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | dli-1 | Person_evidence | WBPerson237 | |||||
| Sequence_name | C39E9.14 | ||||||||
| Molecular_name | C39E9.14a | ||||||||
| C39E9.14a.1 | |||||||||
| CE30892 | |||||||||
| C39E9.14b | |||||||||
| CE30893 | |||||||||
| C39E9.14b.1 | |||||||||
| Other_name | CELE_C39E9.14 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dli-1 | ||||||||
| DB_info | Database | AceView | gene | 4N862 | |||||
| WormQTL | gene | WBGene00001007 | |||||||
| WormFlux | gene | WBGene00001007 | |||||||
| NDB | locus_tag | CELE_C39E9.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001007|UniProtKB=G5ED34 | |||||||
| family | PTHR12688 | ||||||||
| NCBI | gene | 178260 | |||||||
| RefSeq | protein | NM_070117.10 | |||||||
| NM_070118.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF314138 | |||||||
| TrEMBL | UniProtAcc | G5ECK7 | |||||||
| G5ED34 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ED34 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dli | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00026521 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00006960 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Concise_description | dli-1 encodes a dynein light intermediate chain; dli-1 activity, presumably as part of a cytoplasmic dynein minus-end-directed motor complex, is required for mitoses throughout development, for pronuclear and nuclear migration, and for normal neuronal function; DLI-1 has been shown to physically interact with the ZYG-12 HOOK-domain containing protein and the UNC-16 JIP3 (c-Jun N-terminal kinase (JNK)-interacting protein 3) protein. | Paper_evidence | WBPaper00004901 | |||||
| WBPaper00006310 | |||||||||
| WBPaper00006494 | |||||||||
| WBPaper00038128 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 09 Mar 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable dynein heavy chain binding activity. Involved in regulation of dendrite morphogenesis and retrograde axonal transport. Located in microtubule plus-end and neuron projection. Expressed in ciliated neurons; hypodermis; and pharynx. Is an ortholog of human DYNC1LI2 (dynein cytoplasmic 1 light intermediate chain 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E9.14a | |||||||
| C39E9.14b | |||||||||
| Corresponding_transcript | C39E9.14a.1 | ||||||||
| C39E9.14b.1 | |||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf652325 | ||||||||
| WBsf981838 | |||||||||
| WBsf998329 | |||||||||
| WBsf231085 | |||||||||
| WBsf231086 | |||||||||
| WBsf231087 | |||||||||
| WBsf231088 | |||||||||
| Experimental_info | RNAi_result (30) | ||||||||
| Expr_pattern | Expr9590 | ||||||||
| Expr11532 | |||||||||
| Expr12314 | |||||||||
| Expr1010675 | |||||||||
| Expr1030628 | |||||||||
| Expr1146210 | |||||||||
| Expr2010949 | |||||||||
| Expr2029188 | |||||||||
| Drives_construct | WBCnstr00014154 | ||||||||
| WBCnstr00020989 | |||||||||
| WBCnstr00037144 | |||||||||
| Construct_product | WBCnstr00014821 | ||||||||
| WBCnstr00019061 | |||||||||
| WBCnstr00020989 | |||||||||
| WBCnstr00037144 | |||||||||
| Antibody | WBAntibody00002067 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (88) | |||||||||
| Map_info | Map | IV | Position | 7.91039 | Error | 0.026329 | |||
| Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4862 | |||||||
| 4831 | |||||||||
| 4871 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Sequence connection from [Yoder J, Han M] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
