WormBase Tree Display for Gene: WBGene00000969
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WBGene00000969 | SMap | S_parent | Sequence | F56D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dhs-5 | Person_evidence | WBPerson651 | |||||
Sequence_name | F56D1.5 | ||||||||
Molecular_name | F56D1.5 | ||||||||
F56D1.5.1 | |||||||||
CE28036 | |||||||||
Other_name | F56D1.e | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_F56D1.5 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | dhs-5 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dhs | ||||||||
Allele (30) | |||||||||
Strain | WBStrain00004713 | ||||||||
WBStrain00004721 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00056179 | ||||||||
00056180 | |||||||||
00056181 | |||||||||
00056182 | |||||||||
00056183 | |||||||||
Ortholog (31) | |||||||||
Paralog (38) | |||||||||
Structured_description | Concise_description | dhs-5 encodes a possible steroid dehydrogenase; DHS-5 generally resembles short chain-type alcohol/other dehydrogenases, but has two predicted N-terminal transmembrane sequences, and its closest relatives in vertebrates are known or putative steroid dehydrogenases such as hydroxysteroid (17-beta) dehydrogenase 12 from mouse (also known as KIK-I or DHBK_MOUSE). | Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in endoplasmic reticulum. Expressed in enteric muscle; hypodermis; and vm1. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56D1.5 | |||||||
Corresponding_transcript | F56D1.5.1 | ||||||||
Other_sequence (34) | |||||||||
Associated_feature | WBsf644195 | ||||||||
WBsf654866 | |||||||||
WBsf657593 | |||||||||
WBsf716686 | |||||||||
WBsf221284 | |||||||||
Experimental_info | RNAi_result | WBRNAi00048684 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048685 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102778 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3902 | ||||||||
Expr1018035 | |||||||||
Expr1030604 | |||||||||
Expr1152443 | |||||||||
Expr2010919 | |||||||||
Expr2029158 | |||||||||
Drives_construct | WBCnstr00011735 | ||||||||
WBCnstr00037170 | |||||||||
Construct_product | WBCnstr00037170 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (157) | |||||||||
Interaction (198) | |||||||||
Map_info | Map | II | Position | -1.44579 | Error | 0.014281 | |||
Positive | Positive_clone | F56D1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027104 | ||||||||
WBPaper00033099 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065106 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |