WormBase Tree Display for Gene: WBGene00000969
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| WBGene00000969 | SMap | S_parent | Sequence | F56D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-5 | Person_evidence | WBPerson651 | |||||
| Sequence_name | F56D1.5 | ||||||||
| Molecular_name | F56D1.5 | ||||||||
| F56D1.5.1 | |||||||||
| CE28036 | |||||||||
| Other_name | F56D1.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F56D1.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | dhs-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele | WBVar02148829 | Inferred_automatically | From strain object: CB6742 | ||||||
| WBVar02148831 | Inferred_automatically | From strain object: CB6794 | |||||||
| WBVar01499702 | |||||||||
| WBVar01719741 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01477489 | |||||||||
| WBVar00732127 | |||||||||
| WBVar00732128 | |||||||||
| WBVar00732129 | |||||||||
| WBVar00732130 | |||||||||
| WBVar00732131 | |||||||||
| WBVar00732132 | |||||||||
| WBVar00732133 | |||||||||
| WBVar00732134 | |||||||||
| WBVar00732135 | |||||||||
| WBVar00732136 | |||||||||
| WBVar00732137 | |||||||||
| WBVar00732138 | |||||||||
| WBVar00732139 | |||||||||
| WBVar00732140 | |||||||||
| WBVar00732141 | |||||||||
| WBVar02002675 | |||||||||
| WBVar00732142 | |||||||||
| WBVar00732143 | |||||||||
| WBVar00732144 | |||||||||
| WBVar00366215 | |||||||||
| WBVar00366216 | |||||||||
| WBVar00366217 | |||||||||
| WBVar00366218 | |||||||||
| WBVar02129948 | |||||||||
| Strain | WBStrain00004713 | ||||||||
| WBStrain00004721 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056179 | ||||||||
| 00056180 | |||||||||
| 00056181 | |||||||||
| 00056182 | |||||||||
| 00056183 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | dhs-5 encodes a possible steroid dehydrogenase; DHS-5 generally resembles short chain-type alcohol/other dehydrogenases, but has two predicted N-terminal transmembrane sequences, and its closest relatives in vertebrates are known or putative steroid dehydrogenases such as hydroxysteroid (17-beta) dehydrogenase 12 from mouse (also known as KIK-I or DHBK_MOUSE). | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in endoplasmic reticulum. Expressed in enteric muscle; hypodermis; and vm1. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56D1.5 | |||||||
| Corresponding_transcript | F56D1.5.1 | ||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf644195 | ||||||||
| WBsf654866 | |||||||||
| WBsf657593 | |||||||||
| WBsf716686 | |||||||||
| WBsf221284 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048684 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048685 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102778 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3902 | ||||||||
| Expr1018035 | |||||||||
| Expr1030604 | |||||||||
| Expr1152443 | |||||||||
| Expr2010919 | |||||||||
| Expr2029158 | |||||||||
| Drives_construct | WBCnstr00011735 | ||||||||
| WBCnstr00037170 | |||||||||
| Construct_product | WBCnstr00037170 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction (198) | |||||||||
| Map_info | Map | II | Position | -1.44579 | Error | 0.014281 | |||
| Positive | Positive_clone | F56D1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027104 | ||||||||
| WBPaper00033099 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065106 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
