WormBase Tree Display for Gene: WBGene00000961
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| WBGene00000961 | SMap | S_parent | Sequence | T21B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dgn-1 | Person_evidence | WBPerson345 | |||||
| Sequence_name | T21B6.1 | ||||||||
| Molecular_name | T21B6.1 | ||||||||
| T21B6.1.1 | |||||||||
| CE03679 | |||||||||
| T21B6.1.2 | |||||||||
| Other_name | CELE_T21B6.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dgn-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dgn | ||||||||
| Allele (109) | |||||||||
| Possibly_affected_by | WBVar02152924 | ||||||||
| Strain | WBStrain00005032 | ||||||||
| WBStrain00005038 | |||||||||
| WBStrain00005039 | |||||||||
| WBStrain00047387 | |||||||||
| WBStrain00053443 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00018943 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | dgn-1 encodes dystroglycan, a basement membrane component. | Paper_evidence | WBPaper00027321 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 26 Jan 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable laminin binding activity. Involved in anatomical structure morphogenesis; inductive cell migration; and positive regulation of locomotion. Located in basal plasma membrane. Expressed in several structures, including ALM; PVP; e2; gonad; and lumbar ganglion. Human ortholog(s) of this gene implicated in Duchenne muscular dystrophy; Fukuyama congenital muscular dystrophy; autosomal recessive limb-girdle muscular dystrophy type 2D; autosomal recessive limb-girdle muscular dystrophy type 2P; bronchopulmonary dysplasia; congenital muscular dystrophy-dystroglycanopathy type A9; and inclusion body myositis. Is an ortholog of human DAG1 (dystroglycan 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110278 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||
| DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:11723 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:3429 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:0110293 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:11650 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:0111232 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| Molecular_info | Corresponding_CDS | T21B6.1 | |||||||
| Corresponding_transcript | T21B6.1.1 | ||||||||
| T21B6.1.2 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (19) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035744 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018957 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092897 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4218 | ||||||||
| Expr4219 | |||||||||
| Expr9931 | |||||||||
| Expr12559 | |||||||||
| Expr14845 | |||||||||
| Expr1022924 | |||||||||
| Expr1030596 | |||||||||
| Expr1157255 | |||||||||
| Expr2010868 | |||||||||
| Expr2029106 | |||||||||
| Drives_construct | WBCnstr00011834 | ||||||||
| WBCnstr00014941 | |||||||||
| WBCnstr00015884 | |||||||||
| WBCnstr00037177 | |||||||||
| WBCnstr00038162 | |||||||||
| Construct_product | WBCnstr00011834 | ||||||||
| WBCnstr00015884 | |||||||||
| WBCnstr00016598 | |||||||||
| WBCnstr00037177 | |||||||||
| WBCnstr00038162 | |||||||||
| Antibody | WBAntibody00001077 | ||||||||
| WBAntibody00001078 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | X | Position | 2.70681 | Error | 0.005584 | |||
| Positive | Positive_clone | T21B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (23) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
