WormBase Tree Display for Gene: WBGene00000961
expand all nodes | collapse all nodes | view schema
| WBGene00000961 | SMap | S_parent | Sequence | T21B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dgn-1 | Person_evidence | WBPerson345 | |||||
| Sequence_name | T21B6.1 | ||||||||
| Molecular_name | T21B6.1 | ||||||||
| T21B6.1.1 | |||||||||
| CE03679 | |||||||||
| T21B6.1.2 | |||||||||
| Other_name | CELE_T21B6.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dgn-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dgn | ||||||||
| Allele | WBVar01184384 | ||||||||
| WBVar01184385 | |||||||||
| WBVar00064784 | |||||||||
| WBVar01184386 | |||||||||
| WBVar01499887 | |||||||||
| WBVar01184387 | |||||||||
| WBVar01184388 | |||||||||
| WBVar01499888 | |||||||||
| WBVar01184389 | |||||||||
| WBVar00064789 | |||||||||
| WBVar01184390 | |||||||||
| WBVar01184391 | |||||||||
| WBVar01184392 | |||||||||
| WBVar01184393 | |||||||||
| WBVar01184394 | |||||||||
| WBVar01499710 | |||||||||
| WBVar01184395 | |||||||||
| WBVar01184396 | |||||||||
| WBVar01184397 | |||||||||
| WBVar01184398 | |||||||||
| WBVar01184399 | |||||||||
| WBVar01759362 | |||||||||
| WBVar01184400 | |||||||||
| WBVar01184401 | |||||||||
| WBVar01759363 | |||||||||
| WBVar01184402 | |||||||||
| WBVar01184403 | |||||||||
| WBVar01184404 | |||||||||
| WBVar00516265 | |||||||||
| WBVar01184405 | |||||||||
| WBVar01184406 | |||||||||
| WBVar00516266 | |||||||||
| WBVar00516267 | |||||||||
| WBVar01184407 | |||||||||
| WBVar00516268 | |||||||||
| WBVar01184408 | |||||||||
| WBVar00516269 | |||||||||
| WBVar01184409 | |||||||||
| WBVar01184410 | |||||||||
| WBVar00516270 | |||||||||
| WBVar01184411 | |||||||||
| WBVar00516271 | |||||||||
| WBVar01184412 | |||||||||
| WBVar00516272 | |||||||||
| WBVar01184413 | |||||||||
| WBVar00516273 | |||||||||
| WBVar01184414 | |||||||||
| WBVar00516274 | |||||||||
| WBVar00516275 | |||||||||
| WBVar01184415 | |||||||||
| WBVar00516276 | |||||||||
| WBVar01184416 | |||||||||
| WBVar00516277 | |||||||||
| WBVar01184417 | |||||||||
| WBVar00264098 | |||||||||
| WBVar01184418 | |||||||||
| WBVar00516278 | |||||||||
| WBVar00516279 | |||||||||
| WBVar01184419 | |||||||||
| WBVar01184420 | |||||||||
| WBVar00516280 | |||||||||
| WBVar01184421 | |||||||||
| WBVar01184422 | |||||||||
| WBVar01184423 | |||||||||
| WBVar01184424 | |||||||||
| WBVar01184425 | |||||||||
| WBVar01184426 | |||||||||
| WBVar01184427 | |||||||||
| WBVar01184428 | |||||||||
| WBVar01711122 | |||||||||
| WBVar00256213 | |||||||||
| WBVar02140050 | |||||||||
| WBVar02140051 | |||||||||
| WBVar01527677 | |||||||||
| WBVar02140052 | |||||||||
| WBVar01786982 | |||||||||
| WBVar01786983 | |||||||||
| WBVar01786984 | |||||||||
| WBVar02034712 | |||||||||
| WBVar00054157 | |||||||||
| WBVar01552142 | |||||||||
| WBVar01552143 | |||||||||
| WBVar01825906 | |||||||||
| WBVar02027391 | |||||||||
| WBVar01602161 | |||||||||
| WBVar01620447 | |||||||||
| WBVar01620448 | |||||||||
| WBVar01620449 | |||||||||
| WBVar01184369 | |||||||||
| WBVar01184370 | |||||||||
| WBVar01184371 | |||||||||
| WBVar01184372 | |||||||||
| WBVar01184373 | |||||||||
| WBVar01184374 | |||||||||
| WBVar01184375 | |||||||||
| WBVar01184376 | |||||||||
| WBVar01184377 | |||||||||
| WBVar01184378 | |||||||||
| WBVar01928243 | |||||||||
| WBVar01690208 | |||||||||
| WBVar01184379 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01184380 | |||||||||
| WBVar01470998 | |||||||||
| WBVar01184381 | |||||||||
| WBVar01184382 | |||||||||
| WBVar01470999 | |||||||||
| WBVar01184383 | |||||||||
| WBVar01500067 | |||||||||
| Possibly_affected_by | WBVar02152924 | ||||||||
| Strain | WBStrain00005032 | ||||||||
| WBStrain00005038 | |||||||||
| WBStrain00005039 | |||||||||
| WBStrain00047387 | |||||||||
| WBStrain00053443 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00018943 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | dgn-1 encodes dystroglycan, a basement membrane component. | Paper_evidence | WBPaper00027321 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 26 Jan 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable laminin binding activity. Involved in anatomical structure morphogenesis; inductive cell migration; and positive regulation of locomotion. Located in basal plasma membrane. Expressed in several structures, including ALM; PVP; e2; gonad; and lumbar ganglion. Human ortholog(s) of this gene implicated in Duchenne muscular dystrophy; Fukuyama congenital muscular dystrophy; autosomal recessive limb-girdle muscular dystrophy type 2D; autosomal recessive limb-girdle muscular dystrophy type 2P; bronchopulmonary dysplasia; congenital muscular dystrophy-dystroglycanopathy type A9; and inclusion body myositis. Is an ortholog of human DAG1 (dystroglycan 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110278 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||
| DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:11723 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:3429 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:0110293 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:11650 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| DOID:0111232 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2666) | ||||||
| Molecular_info | Corresponding_CDS | T21B6.1 | |||||||
| Corresponding_transcript | T21B6.1.1 | ||||||||
| T21B6.1.2 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (19) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035744 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018957 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092897 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4218 | ||||||||
| Expr4219 | |||||||||
| Expr9931 | |||||||||
| Expr12559 | |||||||||
| Expr14845 | |||||||||
| Expr1022924 | |||||||||
| Expr1030596 | |||||||||
| Expr1157255 | |||||||||
| Expr2010868 | |||||||||
| Expr2029106 | |||||||||
| Drives_construct | WBCnstr00011834 | ||||||||
| WBCnstr00014941 | |||||||||
| WBCnstr00015884 | |||||||||
| WBCnstr00037177 | |||||||||
| WBCnstr00038162 | |||||||||
| Construct_product | WBCnstr00011834 | ||||||||
| WBCnstr00015884 | |||||||||
| WBCnstr00016598 | |||||||||
| WBCnstr00037177 | |||||||||
| WBCnstr00038162 | |||||||||
| Antibody | WBAntibody00001077 | ||||||||
| WBAntibody00001078 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | X | Position | 2.70681 | Error | 0.005584 | |||
| Positive | Positive_clone | T21B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (23) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
