WormBase Tree Display for Gene: WBGene00000868
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| WBGene00000868 | SMap | S_parent | Sequence | T06E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cyb-3 | |||||||
| Sequence_name | T06E6.2 | ||||||||
| Molecular_name | T06E6.2a | ||||||||
| T06E6.2a.1 | |||||||||
| CE45171 | |||||||||
| T06E6.2b | |||||||||
| CE45189 | |||||||||
| T06E6.2a.2 | |||||||||
| T06E6.2b.1 | |||||||||
| Other_name | cyb-2 | ||||||||
| CELE_T06E6.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | cyb-3 | ||||||||
| DB_info | Database | AceView | gene | 5P877 | |||||
| WormQTL | gene | WBGene00000868 | |||||||
| WormFlux | gene | WBGene00000868 | |||||||
| NDB | locus_tag | CELE_T06E6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000868|UniProtKB=Q10654 | |||||||
| family | PTHR10177 | ||||||||
| NCBI | gene | 180040 | |||||||
| RefSeq | protein | NM_074424.10 | |||||||
| NM_001028941.4 | |||||||||
| SwissProt | UniProtAcc | Q10654 | |||||||
| TREEFAM | TREEFAM_ID | TF101001 | |||||||
| UniProt_GCRP | UniProtAcc | Q10654 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyb | ||||||||
| Allele (48) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted cyclin B. [KB] | ||||||||
| Strain | WBStrain00035729 | ||||||||
| WBStrain00005799 | |||||||||
| WBStrain00054803 | |||||||||
| WBStrain00054976 | |||||||||
| WBStrain00048566 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056415 | ||||||||
| 00056416 | |||||||||
| 00056417 | |||||||||
| 00056418 | |||||||||
| 00056419 | |||||||||
| 00056420 | |||||||||
| 00056421 | |||||||||
| 00056422 | |||||||||
| 00056423 | |||||||||
| 00056424 | |||||||||
| 00056425 | |||||||||
| 00056426 | |||||||||
| 00056427 | |||||||||
| 00056428 | |||||||||
| 00056429 | |||||||||
| 00056430 | |||||||||
| 00056431 | |||||||||
| 00056432 | |||||||||
| 00056433 | |||||||||
| 00056434 | |||||||||
| 00056435 | |||||||||
| 00056436 | |||||||||
| 00056437 | |||||||||
| 00056438 | |||||||||
| 00056439 | |||||||||
| 00056440 | |||||||||
| 00056441 | |||||||||
| 00056442 | |||||||||
| 00107910 | |||||||||
| 00107911 | |||||||||
| Ortholog (55) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Concise_description | cyb-3 encodes one of four C. elegans cyclin B family members that is most closely related to the B3-type cyclins; cyb-3 is required for a number of dynein-related mitotic processes and specifically for initiation of anaphase chromosome segregation; cyb-3 is also required for completion of meiosis II and proper pronuclear migration, centrosome maturation, and pronuclear condensation in the fertilized oocyte; cyb-3 is also essential for embryonic viability. | Paper_evidence | WBPaper00004540 | |||||
| WBPaper00005598 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00037839 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 01 Apr 2011 00:00:00 | ||||||||
| Automated_description | Enables cyclin-dependent protein serine/threonine kinase regulator activity. Involved in several processes, including chromosome organization; regulation of cell cycle; and sexual reproduction. Acts upstream of or within nematode male tail tip morphogenesis. Located in cytoplasm and nucleus. Expressed in several structures, including EMS; Psub2; germ cell; germ line; and male gonad. Is an ortholog of human CCNB3 (cyclin B3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06E6.2a | |||||||
| T06E6.2b | |||||||||
| Corresponding_CDS_history | T06E6.2:wp51 | ||||||||
| T06E6.2a:wp216 | |||||||||
| T06E6.2b:wp216 | |||||||||
| Corresponding_transcript | T06E6.2a.1 | ||||||||
| T06E6.2a.2 | |||||||||
| T06E6.2b.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result (35) | ||||||||
| Expr_pattern (15) | |||||||||
| Drives_construct | WBCnstr00037236 | ||||||||
| WBCnstr00041763 | |||||||||
| Construct_product | WBCnstr00001758 | ||||||||
| WBCnstr00015134 | |||||||||
| WBCnstr00015136 | |||||||||
| WBCnstr00037236 | |||||||||
| WBCnstr00041763 | |||||||||
| Antibody | WBAntibody00001667 | ||||||||
| WBAntibody00002046 | |||||||||
| WBAntibody00002047 | |||||||||
| WBAntibody00002745 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (234) | |||||||||
| Interaction (215) | |||||||||
| WBProcess | WBbiopr:00000073 | ||||||||
| Map_info | Map | V | Position | 7.97972 | Error | 0.013538 | |||
| Positive | Positive_clone | KB#6A2A | |||||||
| T06E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 4246 | |||||||
| 5380 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (47) | |||||||||
| Remark | [Monique Lorson] gene has homology to cyclin B3 genes in other organisms. 11/12/99 | ||||||||
| This gene has been defined and published both as cyb-2 and cyb-3. This old cyb-2 name should not be confused with the new cyb-2.1 and cyb-2.2 genes [020808 krb] | |||||||||
| Sequence connection from [Xu H, Bennett KL] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
