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WormBase Tree Display for Gene: WBGene00000845

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Name Class

WBGene00000845EvidencePerson_evidenceWBPerson170
SMapS_parentSequenceC02C2
IdentityVersion1
NameCGC_namecup-4Person_evidenceWBPerson170
Sequence_nameC02C2.3
Molecular_nameC02C2.3
C02C2.3.1
CE30416
Other_nameCELE_C02C2.3Accession_evidenceNDBBX284603
Public_namecup-4
DB_infoDatabaseAceViewgene3I957
WormQTLgeneWBGene00000845
WormFluxgeneWBGene00000845
NDBlocus_tagCELE_C02C2.3
PanthergeneCAEEL|WormBase=WBGene00000845|UniProtKB=P34271
familyPTHR18945
NCBIgene176104
RefSeqproteinNM_066309.6
SwissProtUniProtAccP34271
UniProt_GCRPUniProtAccP34271
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcup
Allele (34)
StrainWBStrain00031661
RNASeq_FPKM (74)
GO_annotation (31)
OrthologWBGene00064099Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00033246Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00163523Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00108406Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00120900Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00268467Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g6036Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8381Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8017Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7454Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3142Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18239Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7643Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6200Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3390Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1046Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00300.g8791Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cup-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold615.g5984Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_05060.g34304Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07992Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24337Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009145Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04563Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22206Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30043200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8240Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246301Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262473Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (100)
Structured_description (2)
Molecular_infoCorresponding_CDSC02C2.3
Corresponding_transcriptC02C2.3.1
Other_sequenceJO468316.1
JI169898.1
Oden_isotig23439
Associated_featureWBsf645364
WBsf225290
Experimental_infoRNAi_result (14)
Expr_patternExpr3280
Expr16469
Expr1011461
Expr1030524
Expr1143520
Expr1200314
Expr2010596
Expr2028836
Drives_constructWBCnstr00005671
WBCnstr00005672
WBCnstr00011282
WBCnstr00037250
Construct_productWBCnstr00007433
WBCnstr00011282
WBCnstr00037250
Microarray_results (20)
Expression_cluster (119)
InteractionWBInteraction000051699
WBInteraction000390325
WBInteraction000421321
WBInteraction000585701
Map_infoMapIIIPosition-0.533135Error0.003482
PositivePositive_cloneC02C2Inferred_automaticallyFrom sequence, transcript, pseudogene data
pJF148Person_evidenceWBPerson170
Mapping_dataMulti_point3952
5055
Reference (13)
RemarkpJF148 is identified as positive via stable transformation rescue, ar494 mutation, RNAiPerson_evidenceWBPerson170
MethodGene