WormBase Tree Display for Gene: WBGene00064099

WBGene00064099 SMap: S_parent: Sequence: Crem_Contig46
  Identity: Version: 3
    Name: CGC_name: Cre-cup-4 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26671
      Molecular_name: CRE26671
        CRE26671.1
        RP44662
      Other_name: cr01.sctg45.wum.35
      Public_name: Cre-cup-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-cup-4
        3 03 Jul 2008 11:45:56 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26671
                Other_name: cr01.sctg45.wum.35
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cup
    RNASeq_FPKM: WBls:0000004 0.269983 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.583956 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.89793 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 1.3563 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.94134 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.94313 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.52639 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        3.88982 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.961355 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.48713 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.19583 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        3.30422 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 2.03527 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.89284 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.63145 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        5.30498 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.36694 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        7.10244 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        7.8966 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        8.27128 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 2.70961 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.09025 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00159451
      00159452
      00159453
      00159454
      00159455
      00159456
    Ortholog (29)
    Paralog (121)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cup-4. In C. elegans, cup-4 is involved in several processes, including determination of adult lifespan; positive regulation of egg-laying behavior; and response to caloric restriction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26671
    Corresponding_transcript: CRE26671.1
    Other_sequence: Oden_isotig23439
  Experimental_info: Expr_pattern: Expr1094594
    Microarray_results: GPL14146_CRE26671_218-277_0.874_34_B
      GPL14146_CRE26671_522-581_0.881_30_A
      GPL14146_CRE26671_739-798_0.931_4_C
  Method: Gene