WormBase Tree Display for Gene: WBGene00000778

WBGene00000778 Evidence: Person_evidence: WBPerson567
  SMap: S_parent: Sequence: D1069
  Identity: Version: 1
    Name: CGC_name: cpn-2 Person_evidence: WBPerson268
      Sequence_name: D1069.2
      Molecular_name: D1069.2a
        D1069.2a.1
        CE38495
        D1069.2b
        CE50780
        D1069.2b.1
      Other_name: CELE_D1069.2 Accession_evidence: NDB BX284602
      Public_name: cpn-2
    DB_info: Database: AceView gene 2A629
        WormQTL gene WBGene00000778
        WormFlux gene WBGene00000778
        NDB locus_tag CELE_D1069.2
        Panther gene CAEEL|WormBase=WBGene00000778|UniProtKB=O44788
          family PTHR18959
        NCBI gene 173424
        RefSeq protein NM_001313598.3
            NM_061312.6
        TrEMBL UniProtAcc O44788
            A0A0K3AWU9
        UniProt_GCRP UniProtAcc O44788
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    Allele (27)
    RNASeq_FPKM (74)
    GO_annotation: 00001564
      00001565
      00001566
    Ortholog (67)
    Paralog: WBGene00000777 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00006819 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020808 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019361 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016898 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000779 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000780 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: cpn-2 encodes a calponin homolog, more similar to the calponin paralogs transgelin (SM22 alpha) or neuronal protein NP25 than to calponin per se. Paper_evidence: WBPaper00012852
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be located in actin cytoskeleton. Is an ortholog of human TAGLN (transgelin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D1069.2a
      D1069.2b
    Corresponding_CDS_history: D1069.2:wp142
    Corresponding_transcript: D1069.2a.1
      D1069.2b.1
    Other_sequence (31)
    Associated_feature: WBsf643905
      WBsf717618
      WBsf986386
      WBsf986387
      WBsf220750
  Experimental_info: RNAi_result: WBRNAi00030355 Inferred_automatically: RNAi_primary
      WBRNAi00043404 Inferred_automatically: RNAi_primary
      WBRNAi00012544 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018716
      Expr1030482
      Expr1147390
      Expr2010494
      Expr2028734
    Drives_construct: WBCnstr00037283
    Construct_product: WBCnstr00037283
    Microarray_results (20)
    Expression_cluster (181)
    Interaction (146)
  Map_info: Map: II Position: -15.6207 Error: 0.000884
    Positive: Positive_clone: D1069 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene