WormBase Tree Display for Gene: WBGene00000534
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| WBGene00000534 | SMap | S_parent | Sequence | R01B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpi-2 | Paper_evidence | WBPaper00026724 | |||||
| WBPaper00005846 | |||||||||
| WBPaper00024997 | |||||||||
| Person_evidence | WBPerson4368 | ||||||||
| WBPerson390 | |||||||||
| Sequence_name | R01B10.1 | ||||||||
| Molecular_name | R01B10.1a | ||||||||
| R01B10.1a.1 | |||||||||
| CE25962 | |||||||||
| R01B10.1b | |||||||||
| Other_name | cli-1 | ||||||||
| CELE_R01B10.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | cpi-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 04 Jan 2006 11:04:12 | WBPerson2970 | Name_change | CGC_name | cpi-2 | ||||
| Other_name | cli-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpi | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00031908 | ||||||||
| WBStrain00054915 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00000535 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016523 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00023486 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables cysteine-type endopeptidase inhibitor activity. Involved in positive regulation of vitellogenesis; regulation of oocyte development; and regulation of protein processing. Located in extracellular space and yolk granule. Expressed in hypodermis; pharyngeal gland cell; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; CST3-related cerebral amyloid angiopathy; artery disease (multiple); and autoimmune disease of the nervous system (multiple). Is an ortholog of several human genes including CST1 (cystatin SN); CST2 (cystatin SA); and CST3 (cystatin C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | R01B10.1a | |||||||
| Corresponding_transcript | R01B10.1b | ||||||||
| R01B10.1a.1 | |||||||||
| Other_sequence (85) | |||||||||
| Associated_feature | WBsf028073 | ||||||||
| WBsf646851 | |||||||||
| WBsf655095 | |||||||||
| WBsf661303 | |||||||||
| WBsf661304 | |||||||||
| WBsf661305 | |||||||||
| WBsf1000163 | |||||||||
| WBsf231832 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr3711 | ||||||||
| Expr7868 | |||||||||
| Expr7869 | |||||||||
| Expr1020802 | |||||||||
| Expr1030320 | |||||||||
| Expr1154795 | |||||||||
| Expr2010490 | |||||||||
| Expr2028730 | |||||||||
| Drives_construct | WBCnstr00012962 | ||||||||
| Construct_product | WBCnstr00012962 | ||||||||
| Antibody | WBAntibody00001122 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000143932 | ||||||||
| WBInteraction000306622 | |||||||||
| WBInteraction000552020 | |||||||||
| WBInteraction000577508 | |||||||||
| Map_info | Map | V | Position | -0.400385 | Error | 0.008156 | |||
| Positive | Positive_clone | R01B10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4964 | |||||||
| 4240 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Hashmi S, Lustigan S], [krb 020711] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
