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WormBase Tree Display for Gene: WBGene00000515

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Name Class

WBGene00000515EvidencePaper_evidenceWBPaper00005916
SMapS_parentSequenceT27A10
IdentityVersion1
NameCGC_nameckc-1
Sequence_nameT27A10.3
Molecular_nameT27A10.3a
T27A10.3a.1
CE07553
T27A10.3b
CE33710
T27A10.3b.1
T27A10.3b.2
Other_nameCELE_T27A10.3Accession_evidenceNDBBX284606
Public_nameckc-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classckc
Allele (33)
RNASeq_FPKM (74)
GO_annotation00076543
00076544
00076545
00076546
00076547
Ortholog (38)
ParalogWBGene00000509Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000510Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000511Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000512Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000513Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000514Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionckc-1 encodes a putative ethanolamine or choline kinase, with somewhatmore sequence similarity to ethanolamine kinases; CKC-1 is the sole memberof a 'C' group of choline/ethanolamine kinases.Paper_evidenceWBPaper00005916
Curator_confirmedWBPerson567
Date_last_updated11 Aug 2006 00:00:00
Automated_descriptionPredicted to enable ethanolamine kinase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human ETNK2 (ethanolamine kinase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST27A10.3a
T27A10.3b
Corresponding_transcriptT27A10.3a.1
T27A10.3b.1
T27A10.3b.2
Other_sequence (26)
Associated_featureWBsf647956
WBsf662613
WBsf662614
WBsf1004668
WBsf1022637
WBsf235503
WBsf235504
WBsf235505
WBsf235506
WBsf235507
Experimental_infoRNAi_resultWBRNAi00054255Inferred_automaticallyRNAi_primary
WBRNAi00083993Inferred_automaticallyRNAi_primary
WBRNAi00019297Inferred_automaticallyRNAi_primary
WBRNAi00084001Inferred_automaticallyRNAi_primary
WBRNAi00036014Inferred_automaticallyRNAi_primary
WBRNAi00084003Inferred_automaticallyRNAi_primary
Expr_patternExpr1012898
Expr1030305
Expr1157802
Expr2010030
Expr2028271
Drives_constructWBCnstr00037483
Construct_productWBCnstr00037483
Microarray_results (28)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00052987:UV_downregulated_xpc-1;csb-1
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056284:ints-4(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:CAN
WBPaper00061341:28C_48h_downregulated
WBPaper00061527:gst-26-pho-1_10767
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062440:crh-1(syb385)_upregulated
WBPaper00062590:Aging_downregulated_hypodermis
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064130:Beta-Amyloid_upregulated_protein
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_downregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:69_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4386_cluster_1_5
cgc4489_group_2
WBPaper00025032:cluster_23
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00034757:down_by_oxidative_stress
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040184:hcf-1down_sir-2.1down_daf-2nc
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041207:CE_dauer_down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
[cgc5767]:cluster_7
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(83_min)
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SET
[cgc5767]:expression_class_SE_pi(53_min)
InteractionWBInteraction000030116
WBInteraction000030117
WBInteraction000034326
WBInteraction000034565
WBInteraction000037283
WBInteraction000037284
WBInteraction000051971
WBInteraction000051973
WBInteraction000146597
WBInteraction000148734
WBInteraction000159849
WBInteraction000171374
WBInteraction000172508
WBInteraction000175722
WBInteraction000183510
WBInteraction000184552
WBInteraction000191961
WBInteraction000197112
WBInteraction000198265
WBInteraction000215665
WBInteraction000220203
WBInteraction000233792
WBInteraction000251479
WBInteraction000256260
WBInteraction000257579
WBInteraction000270598
WBInteraction000281243
WBInteraction000298490
WBInteraction000321679
WBInteraction000324077
WBInteraction000325979
WBInteraction000334530
WBInteraction000349885
WBInteraction000351808
WBInteraction000355181
WBInteraction000355607
WBInteraction000363721
WBInteraction000370518
WBInteraction000379059
WBInteraction000386548
WBInteraction000388392
WBInteraction000388864
WBInteraction000396596
WBInteraction000410017
WBInteraction000412634
WBInteraction000415062
WBInteraction000415509
WBInteraction000416919
WBInteraction000421751
WBInteraction000430693
WBInteraction000430741
WBInteraction000432888
WBInteraction000444144
WBInteraction000445781
WBInteraction000447103
WBInteraction000448087
WBInteraction000449320
WBInteraction000456651
WBInteraction000579671
Map_infoMapXPosition-10.0262
PositivePositive_cloneT27A10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005916
WBPaper00038491
WBPaper00042257
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene