WormBase Tree Display for Gene: WBGene00000462
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| WBGene00000462 | SMap | S_parent | Sequence | T26C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ceh-41 | Person_evidence | WBPerson83 | |||||
| Sequence_name | T26C11.5 | ||||||||
| Molecular_name | T26C11.5 | ||||||||
| T26C11.5.1 | |||||||||
| CE05024 | |||||||||
| Other_name | CELE_T26C11.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ceh-41 | ||||||||
| DB_info | Database | AceView | gene | XC466 | |||||
| WormQTL | gene | WBGene00000462 | |||||||
| WormFlux | gene | WBGene00000462 | |||||||
| NDB | locus_tag | CELE_T26C11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000462|UniProtKB=Q22810 | |||||||
| family | PTHR24391 | ||||||||
| NCBI | gene | 180503 | |||||||
| RefSeq | protein | NM_075939.4 | |||||||
| TREEFAM | TREEFAM_ID | TF106461 | |||||||
| TrEMBL | UniProtAcc | Q22810 | |||||||
| UniProt_GCRP | UniProtAcc | Q22810 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (41) | |||||||||
| Legacy_information | [Burglin T,03/98] ONECUT homeobox gene | ||||||||
| Strain | WBStrain00051865 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076500 | ||||||||
| 00076501 | |||||||||
| 00076502 | |||||||||
| 00076503 | |||||||||
| 00076504 | |||||||||
| 00076505 | |||||||||
| 00076506 | |||||||||
| 00076507 | |||||||||
| 00076508 | |||||||||
| 00107433 | |||||||||
| Contained_in_operon | CEOPX024 | ||||||||
| Ortholog | WBGene00141357 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
| WBGene00124758 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00064450 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| chrX_pilon.g18515 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00264573 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
| WBGene00289126 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00000439 | ||||||||
| WBGene00007417 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018446 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006970 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009553 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ceh-41 encodes a a ONECUT class CUT homeobox protein with a single N-terminal OCAM domain; the OCAM domain is a nematode-specific motif conserved between CEH-21, CEH-41, and T02B5.2; ceh-41 is one of three nematode-specific ONECUT genes in a cluster with ceh-21 and ceh-39; ceh-41 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00005164 | |||||
| WBPaper00005654 | |||||||||
| Person_evidence | WBPerson83 | ||||||||
| Curator_confirmed | WBPerson13481 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in body wall musculature; neurons; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T26C11.5 | |||||||
| Corresponding_transcript | T26C11.5.1 | ||||||||
| Associated_feature | WBsf670126 | ||||||||
| WBsf978667 | |||||||||
| WBsf237031 | |||||||||
| Transcription_factor | WBTranscriptionFactor000500 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035986 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054184 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019249 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092894 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7683 | ||||||||
| Expr10249 | |||||||||
| Expr10250 | |||||||||
| Expr15573 | |||||||||
| Expr1026608 | |||||||||
| Expr1030266 | |||||||||
| Expr1157726 | |||||||||
| Expr2009885 | |||||||||
| Expr2028125 | |||||||||
| Drives_construct | WBCnstr00012828 | ||||||||
| WBCnstr00015205 | |||||||||
| WBCnstr00015206 | |||||||||
| WBCnstr00016516 | |||||||||
| WBCnstr00037518 | |||||||||
| WBCnstr00041959 | |||||||||
| Construct_product | WBCnstr00037518 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | X | Position | -17.4904 | Error | 0.012184 | |||
| Positive | Positive_clone | T26C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5050 | |||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Expressed | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
