WormBase Tree Display for Gene: WBGene00000116
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WBGene00000116 | SMap | S_parent | Sequence | C54D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | alh-10 | Person_evidence | WBPerson651 | |||||
Sequence_name | C54D1.4 | ||||||||
Molecular_name | C54D1.4 | ||||||||
C54D1.4.1 | |||||||||
CE06980 | |||||||||
Other_name | CELE_C54D1.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | alh-10 | ||||||||
DB_info | Database | AceView | gene | XH760 | |||||
WormQTL | gene | WBGene00000116 | |||||||
WormFlux | gene | WBGene00000116 | |||||||
NDB | locus_tag | CELE_C54D1.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000116|UniProtKB=Q18822 | |||||||
family | PTHR43720 | ||||||||
NCBI | gene | 180979 | |||||||
RefSeq | protein | NM_076802.5 | |||||||
TREEFAM | TREEFAM_ID | TF314129 | |||||||
TrEMBL | UniProtAcc | Q18822 | |||||||
UniProt_GCRP | UniProtAcc | Q18822 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | alh | ||||||||
Allele (53) | |||||||||
Strain | WBStrain00052128 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00062467 | ||||||||
00062468 | |||||||||
00106828 | |||||||||
00106829 | |||||||||
Ortholog (31) | |||||||||
Paralog | WBGene00000107 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00000108 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000109 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000110 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000111 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000112 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000113 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000114 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000115 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000117 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000118 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Is an ortholog of human ALDH8A1 (aldehyde dehydrogenase 8 family member A1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C54D1.4 | |||||||
Corresponding_transcript | C54D1.4.1 | ||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf654108 | ||||||||
WBsf670683 | |||||||||
WBsf670684 | |||||||||
WBsf1005743 | |||||||||
WBsf237549 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012378 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030135 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078252 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043130 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083136 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043129 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083133 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012376 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043127 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089019 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram983 | ||||||||
Expr5583 | |||||||||
Expr1025432 | |||||||||
Expr1030063 | |||||||||
Expr1147098 | |||||||||
Expr2009299 | |||||||||
Expr2027536 | |||||||||
Drives_construct | WBCnstr00002501 | ||||||||
WBCnstr00037720 | |||||||||
Construct_product | WBCnstr00037720 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (161) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | X | Position | -1.82686 | |||||
Positive | Positive_clone | C54D1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035962 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |