WormBase Tree Display for Gene: WBGene00000107
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| WBGene00000107 | SMap | S_parent | Sequence | F54D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | alh-1 | Person_evidence | WBPerson651 | |||||
| Sequence_name | F54D8.3 | ||||||||
| Molecular_name | F54D8.3a | ||||||||
| F54D8.3a.1 | |||||||||
| CE29809 | |||||||||
| F54D8.3b | |||||||||
| CE32434 | |||||||||
| F54D8.3b.1 | |||||||||
| F54D8.3b.2 | |||||||||
| Other_name | CELE_F54D8.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | alh-1 | ||||||||
| DB_info | Database | AceView | gene | 3G169 | |||||
| WormQTL | gene | WBGene00000107 | |||||||
| WormFlux | gene | WBGene00000107 | |||||||
| NDB | locus_tag | CELE_F54D8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000107|UniProtKB=Q20780 | |||||||
| family | PTHR11699 | ||||||||
| NCBI | gene | 175691 | |||||||
| RefSeq | protein | NM_001392085.1 | |||||||
| NM_065680.8 | |||||||||
| TrEMBL | UniProtAcc | Q8IG19 | |||||||
| Q20780 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20780 | |||||||
| OMIM | gene | 603687 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | alh | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00001668 | ||||||||
| WBStrain00001202 | |||||||||
| WBStrain00001584 | |||||||||
| WBStrain00001669 | |||||||||
| WBStrain00003724 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069116 | ||||||||
| 00069117 | |||||||||
| 00106798 | |||||||||
| 00106799 | |||||||||
| Ortholog (48) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | alh-1 is orthologous to the human gene ALDEHYDE DEHYDROGENASE 2, MITOCHONDRIAL (ALDH2; OMIM:100650), in which a polymorphism can lead to acute ethanol intolerance. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable aldehyde dehydrogenase (NAD+) activity. Used to study obesity. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; artery disease (multiple); diabetes mellitus (multiple); and liver disease (multiple). Is an ortholog of human ALDH1B1 (aldehyde dehydrogenase 1 family member B1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:9970 | Homo sapiens | Paper_evidence | WBPaper00035962 | ||||
| Curator_confirmed | WBPerson38202 | ||||||||
| Date_last_updated | 29 Jun 2018 00:00:00 | ||||||||
| Potential_model (16) | |||||||||
| Models_disease_in_annotation | WBDOannot00000567 | ||||||||
| Molecular_info | Corresponding_CDS | F54D8.3a | |||||||
| F54D8.3b | |||||||||
| Corresponding_transcript | F54D8.3a.1 | ||||||||
| F54D8.3b.1 | |||||||||
| F54D8.3b.2 | |||||||||
| Other_sequence (113) | |||||||||
| Associated_feature | WBsf645145 | ||||||||
| WBsf224855 | |||||||||
| WBsf224856 | |||||||||
| WBsf224857 | |||||||||
| WBsf224858 | |||||||||
| WBsf224859 | |||||||||
| WBsf224860 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002095 | ||||||||
| WBCnstr00002424 | |||||||||
| WBCnstr00004159 | |||||||||
| WBCnstr00004219 | |||||||||
| WBCnstr00037727 | |||||||||
| Construct_product | WBCnstr00037727 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (187) | |||||||||
| Interaction (169) | |||||||||
| Map_info | Map | III | Position | -2.19982 | Error | 0.004626 | |||
| Positive | Positive_clone | F54D8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
