WormBase Tree Display for Sequence: T26F2
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| T26F2 | DNA | T26F2 | 16036 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00012058 | 14374 | 12971 | |
| WBGene00077571 | 3443 | 2207 | ||||
| WBGene00045401 | 12310 | 10865 | ||||
| WBGene00012057 | 5966 | 7953 | ||||
| WBGene00050902 | 3653 | 5013 | ||||
| CDS_child (59) | ||||||
| Transcript | T26F2.1a.1 | 5966 | 7953 | |||
| T26F2.1b.1 | 5966 | 7953 | ||||
| T26F2.3.1 | 12140 | 10865 | ||||
| T26F2.3.2 | 12310 | 10865 | ||||
| Pseudogene | T26F2.2 | 14374 | 12971 | |||
| T26F2.4 | 3653 | 5013 | ||||
| T26F2.5 | 3443 | 2207 | ||||
| PCR_product (12) | ||||||
| Allele (146) | ||||||
| Oligo_set | Aff_T26F2.2 | 11668 | 10974 | |||
| Feature_object (34) | ||||||
| Feature_data | T26F2:TranscriptionallyActiveRegion | 1 | 16036 | |||
| T26F2:ChIPSeqTF | 1 | 16036 | ||||
| T26F2:Dust | 1 | 16036 | ||||
| T26F2:inverted | 1 | 16036 | ||||
| Homol_data (14) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | F58E10 | 15933 | ||||
| Overlap_left | R10D12 | |||||
| Clone_left_end | T26F2 | 1 | ||||
| F58E10 | 15933 | |||||
| Clone_right_end | R10D12 | 7113 | ||||
| DB_info | Database | EMBL | NDB_AC | Z82054 | ||
| NDB_SV | Z82054.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Percy CM | ||||
| From_laboratory | HX | |||||
| Date_directory | 970403 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T26F2 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | f99565842372c98e2aede7a3e28190fd | ||||
| Status | Finished | 03 Apr 1997 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 18 Jul 1997 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 7930 | ||
| Right | 7941 | |||||
| Interpolated_map_position | V | 5.86768 | ||||
| Assembly_tags | Clone left end | 1 | 4 | T26F2 | ||
| 15933 | 15936 | F58E10 | ||||
| 16036 | 15933 | |||||
| Finished Left | 1 | 4 | T26F2 | |||
| annotation | 3442 | 3780 | Loop of large inverted repeat orientation of loop is unknown | |||
| 8287 | 8228 | Single clone across repetitive region edited according to repeat.Seemsto be no base pair difference in this region between the 2 arms of this inverted repeat. Restriction digest agrees with data | ||||
| 14699 | 14805 | Region covered by single clonewith 2 different chemistriesThis region is immediately to the leftof a small inverted repeat making confirmation of this sequence difficultRestriction digest of EcoRI gives apredicted band size of 5015 vs 4987from data. | ||||
| Clone right end | 7108 | 7113 | R10D12 | |||
| 7113 | 7108 | |||||
| Finished Right | 16036 | 16033 | T26F2 | |||
| Method | Genomic_canonical |
