WormBase Tree Display for Variation: WBVar00323164
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| WBVar00323164 | Evidence | Paper_evidence | WBPaper00031335 | ||
|---|---|---|---|---|---|
| Name | Public_name | nDf58 | |||
| Other_name | F09A5.3b.1:c.-82+2712_-82+4516del | ||||
| HGVSg | CHROMOSOME_X:g.13144439_13146243del | ||||
| Sequence_details | SMap | S_parent | Sequence | F09A5 | |
| Flanking_sequences | acctgctccgttcttgtccgggcaccgaac | tttacagctgcagctaacagcaaccacacc | |||
| Mapping_target | F09A5 | ||||
| Type_of_mutation | Deletion | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00027486 | ||||
| WBStrain00027570 | |||||
| WBStrain00027571 | |||||
| WBStrain00027572 | |||||
| WBStrain00027578 | |||||
| Laboratory | MT | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00003282 | |||
| WBGene00303113 | |||||
| WBGene00008600 | |||||
| WBGene00196304 | |||||
| WBGene00003283 | |||||
| WBGene00003284 | |||||
| Transcript | F09A5.3b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F09A5.3b.1:c.-82+2712_-82+4516del | ||||
| Intron_number | 1/7 | ||||
| F09A5.11 | VEP_consequence | transcript_ablation | |||
| VEP_impact | HIGH | ||||
| Exon_number | 1/1 | ||||
| F09A5.15 | |||||
| F09A5.6 | |||||
| F09A5.5 | |||||
| F09A5.8 | |||||
| Interactor (13) | |||||
| Genetics | Interpolated_map_position | X | 10.2146 | ||
| Description | Phenotype | WBPhenotype:0000154 | Paper_evidence | WBPaper00055896 | |
| Curator_confirmed | WBPerson35924 | ||||
| WBPhenotype:0001944 | Paper_evidence | WBPaper00055896 | |||
| Curator_confirmed | WBPerson35924 | ||||
| Phenotype_not_observed | WBPhenotype:0000031 | Paper_evidence | WBPaper00036127 | ||
| Curator_confirmed | WBPerson712 | ||||
| WBPhenotype:0000062 | Paper_evidence | WBPaper00036127 | |||
| Curator_confirmed | WBPerson712 | ||||
| WBPhenotype:0001414 | Paper_evidence | WBPaper00036127 | |||
| Curator_confirmed | WBPerson712 | ||||
| WBPhenotype:0001748 | Paper_evidence | WBPaper00036127 | |||
| Curator_confirmed | WBPerson712 | ||||
| Reference | WBPaper00031335 | ||||
| WBPaper00036127 | |||||
| WBPaper00055896 | |||||
| Method | Deletion_allele |
