WormBase Tree Display for Variation: WBVar00142941

WBVar00142941 Evidence: Paper_evidence: WBPaper00027361
  Name: Public_name: e61
    Other_name: e61sd
      F27C1.8.1:c.607G>T
      CE09720:p.Gly203Ter
    HGVSg: CHROMOSOME_I:g.5432445C>A
  Sequence_details: SMap: S_parent: Sequence: F27C1
    Flanking_sequences: ccaggacttgctggaccaccaggacgcgat gacttaccggaaagggacaaccaggagtcg
    Mapping_target: F27C1
    Type_of_mutation: Substitution: g t Paper_evidence: WBPaper00027361
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (325)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00001067
    Transcript: F27C1.8.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F27C1.8.1:c.607G>T
        HGVSp: CE09720:p.Gly203Ter
        cDNA_position: 607
        CDS_position: 607
        Protein_position: 203
        Exon_number: 1/1
        Codon_change: Gga/Tga
        Amino_acid_change: G/*
    Interactor: WBInteraction000052055
      WBInteraction000052058
      WBInteraction000501358
      WBInteraction000501364
      WBInteraction000519055
      WBInteraction000537293
      WBInteraction000537294
  Genetics: Interpolated_map_position: I -0.0011509
    Mapping_data: In_2_point (165)
      In_multi_point (349)
      In_pos_neg_data: 465
        508
        2129
        2515
        3747
        3962
        3970
        3977
        3988
        3996
        4006
        4009
        4012
        4015
        4016
        4023
        4029
        4036
        4043
        4050
        4057
        4064
        4072
        4078
        4088
        4990
        4994
        5000
        5042
        5052
        5061
        5069
        5085
        5092
        5325
        5703
        5852
        6019
        6143
        6197
        6314
        6358
        6374
        6404
        6427
        6433
        6447
        6451
        6466
        6472
        6479
        6486
        6491
        6498
        6506
        6522
        6528
        6537
        6540
        6551
        6563
        6595
        6602
        6607
        6613
        6625
        6643
        6659
        7281
        7287
        8065
        8087
  Description (2)
  Reference (45)
  Remark: Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele