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WormBase Tree Display for Variation: WBVar00142941

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Name Class

WBVar00142941EvidencePaper_evidenceWBPaper00027361
NamePublic_namee61
Other_namee61sd
F27C1.8.1:c.607G>T
CE09720:p.Gly203Ter
HGVSgCHROMOSOME_I:g.5432445C>A
Sequence_detailsSMapS_parentSequenceF27C1
Flanking_sequencesccaggacttgctggaccaccaggacgcgatgacttaccggaaagggacaaccaggagtcg
Mapping_targetF27C1
Type_of_mutationSubstitutiongtPaper_evidenceWBPaper00027361
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
Strain (325)
LaboratoryCB
StatusLive
AffectsGeneWBGene00001067
TranscriptF27C1.8.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF27C1.8.1:c.607G>T
HGVSpCE09720:p.Gly203Ter
cDNA_position607
CDS_position607
Protein_position203
Exon_number1/1
Codon_changeGga/Tga
Amino_acid_changeG/*
InteractorWBInteraction000052055
WBInteraction000052058
WBInteraction000501358
WBInteraction000501364
WBInteraction000519055
WBInteraction000537293
WBInteraction000537294
GeneticsInterpolated_map_positionI-0.0011509
Mapping_dataIn_2_point (165)
In_multi_point2
3
4
5
6
9
10
11
12
13
14
15
17
20
21
22
23
24
27
30
31
32
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34
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37
42
43
44
197
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199
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201
202
204
205
231
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241
243
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270
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272
289
306
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327
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335
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343
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350
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361
364
365
372
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380
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391
396
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414
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452
454
499
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510
511
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515
517
518
527
538
566
567
572
573
574
575
576
604
634
635
636
637
638
639
640
693
694
696
697
719
720
734
813
815
958
959
963
964
965
966
967
968
969
970
973
974
977
980
983
985
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992
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1004
1005
1006
1007
1008
1009
1010
1011
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1016
1017
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1019
1020
1021
1022
1023
1024
1025
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1033
1034
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1037
1038
1039
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1041
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1047
1048
1049
1050
1051
1064
1219
1222
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1230
1288
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1290
1291
1293
1370
1371
1374
1376
1386
1445
1446
1448
1450
1453
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1456
1461
1465
1479
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1481
1678
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1759
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1782
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1787
1788
1825
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1828
1871
1891
1896
1897
1902
2001
2034
2040
2041
2091
2092
2093
2094
2095
2096
2097
2131
2139
2141
2142
2143
2144
2145
2146
2147
2148
2149
2150
2218
2220
2278
2279
2280
2285
2330
2332
2333
2410
2426
2427
2444
2447
2456
2457
2466
2477
2710
2767
2768
2769
2784
3000
3001
3002
3003
3008
3010
3020
3021
3022
3030
3035
3036
3037
3038
3039
3040
3042
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3044
3046
3105
3106
3107
3115
3116
3117
3118
3119
3143
3144
3193
3194
3227
3230
3234
3254
3307
3308
3309
3310
3311
3375
3380
3434
3435
3436
5458
5459
5471
In_pos_neg_data (72)
Description (2)
ReferenceWBPaper00016541
WBPaper00040002
WBPaper00029020
WBPaper00022976
WBPaper00015468
WBPaper00014587
WBPaper00001328
WBPaper00000031
WBPaper00014400
WBPaper00004883
WBPaper00013926
WBPaper00005747
WBPaper00014397
WBPaper00016102
WBPaper00016007
WBPaper00013904
WBPaper00016554
WBPaper00032033
WBPaper00016529
WBPaper00016593
WBPaper00004535
WBPaper00012408
WBPaper00022939
WBPaper00015884
WBPaper00013649
WBPaper00016074
WBPaper00014722
WBPaper00014843
WBPaper00010006
WBPaper00018460
WBPaper00016317
WBPaper00020852
WBPaper00015549
WBPaper00013930
WBPaper00015145
WBPaper00010216
WBPaper00026393
WBPaper00016515
WBPaper00016166
WBPaper00061173
WBPaper00053771
WBPaper00061220
WBPaper00065293
WBPaper00065755
WBPaper00065756
RemarkVariation stub/paper connection generated from the May 2021 NN VFP dataset.
Created by WBPerson51134 from the NN_VFP_triage_pipeline
MethodSubstitution_allele