WormBase Tree Display for Variation: WBVar00142941

WBVar00142941 Evidence: Paper_evidence: WBPaper00027361
  Name: Public_name: e61
    Other_name: e61sd
      F27C1.8.1:c.607G>T
      CE09720:p.Gly203Ter
    HGVSg: CHROMOSOME_I:g.5432445C>A
  Sequence_details: SMap: S_parent: Sequence: F27C1
    Flanking_sequences: ccaggacttgctggaccaccaggacgcgat gacttaccggaaagggacaaccaggagtcg
    Mapping_target: F27C1
    Type_of_mutation: Substitution: g t Paper_evidence: WBPaper00027361
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (325)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00001067
    Transcript: F27C1.8.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F27C1.8.1:c.607G>T
        HGVSp: CE09720:p.Gly203Ter
        cDNA_position: 607
        CDS_position: 607
        Protein_position: 203
        Exon_number: 1/1
        Codon_change: Gga/Tga
        Amino_acid_change: G/*
    Interactor: WBInteraction000052055
      WBInteraction000052058
      WBInteraction000501358
      WBInteraction000501364
      WBInteraction000519055
      WBInteraction000537293
      WBInteraction000537294
  Genetics: Interpolated_map_position: I -0.0011509
    Mapping_data: In_2_point: 1
        3
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        27
        29
        31
        205
        211
        238
        239
        240
        241
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        246
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        259
        265
        330
        391
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        410
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        464
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        478
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        524
        561
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        570
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        599
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        614
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        642
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        646
        738
        787
        788
        1019
        2492
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        2494
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        2499
        2500
        2501
        2502
        2505
        2506
        2520
        2521
        2522
        2523
        2524
        2525
        2526
        2527
        2528
        2529
        2530
        2531
        2532
        2533
        2534
        2535
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        2538
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        2540
        2541
        2542
        2543
        2544
        2545
        2546
        2547
        2548
        2549
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        2553
        2554
        2555
        2556
        2590
        2591
        3194
        3195
        3197
        3198
        3199
        3203
        3206
        3209
        3684
        3685
        3686
        4228
        4747
        5225
        5230
        5246
        5252
        5518
        5837
        6024
        6029
        6030
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        6032
        6033
        6041
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        6049
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        6051
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        6068
        6070
        6078
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        6081
        6082
        6084
        6085
        6086
        6087
        6171
        6194
        6221
      In_multi_point (349)
      In_pos_neg_data (72)
  Description (2)
  Reference (45)
  Remark: Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele