WormBase Tree Display for Sequence: K07E3
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| K07E3 | DNA | K07E3 | 34851 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00000929 | 5769 | 3429 | |
| WBGene00019490 | 29658 | 33981 | ||||
| WBGene00006890 | 7793 | 6772 | ||||
| WBGene00198842 | 16865 | 16650 | ||||
| WBGene00019493 | 18082 | 9004 | ||||
| WBGene00194670 | 27440 | 28464 | ||||
| WBGene00019492 | 3237 | 87 | ||||
| WBGene00019491 | 23517 | 26814 | ||||
| CDS_child (305) | ||||||
| Transcript (13) | ||||||
| Genomic_non_canonical | WRM0610cF08 | 382 | 31505 | |||
| WRM0614cD10 | 3747 | 32969 | ||||
| WRM0640bA09 | 588 | 33903 | ||||
| PCR_product (21) | ||||||
| Allele (552) | ||||||
| Oligo_set | Aff_K07E3.2 | 25970 | 26625 | |||
| Aff_K07E3.3 | 5054 | 3990 | ||||
| Aff_K07E3.4 | 1020 | 234 | ||||
| Aff_K07E3.6 | 10587 | 6954 | ||||
| Aff_K07E3.7 | 14950 | 14252 | ||||
| Feature_object | WBsf1006047 | 3968 | 4048 | |||
| WBsf1006048 | 5848 | 5998 | ||||
| WBsf1006049 | 6228 | 6378 | ||||
| WBsf1006050 | 16168 | 16318 | ||||
| WBsf1006051 | 23288 | 23438 | ||||
| WBsf1006052 | 28988 | 29138 | ||||
| WBsf1006053 | 29288 | 29438 | ||||
| WBsf1023360 | 5818 | 5958 | ||||
| WBsf1023361 | 16168 | 16318 | ||||
| WBsf1023362 | 28968 | 29118 | ||||
| WBsf1023363 | 29308 | 29458 | ||||
| WBsf010825 | 5770 | 5769 | ||||
| WBsf015305 | 18083 | 18082 | ||||
| WBsf018317 | 147 | 142 | ||||
| WBsf018318 | 124 | 123 | ||||
| WBsf022555 | 29657 | 29658 | ||||
| WBsf022622 | 3650 | 3649 | ||||
| WBsf027841 | 2501 | 2500 | ||||
| WBsf027886 | 7794 | 7793 | ||||
| WBsf111822 | 3420 | 3420 | ||||
| WBsf111823 | 6772 | 6772 | ||||
| WBsf112609 | 14964 | 14964 | ||||
| WBsf113320 | 23991 | 23991 | ||||
| WBsf113662 | 3424 | 3424 | ||||
| WBsf113663 | 24307 | 24307 | ||||
| WBsf114174 | 172 | 172 | ||||
| WBsf114719 | 3426 | 3426 | ||||
| WBsf114720 | 25092 | 25092 | ||||
| WBsf116137 | 26757 | 26757 | ||||
| WBsf116368 | 84 | 84 | ||||
| WBsf116882 | 3496 | 3496 | ||||
| WBsf116883 | 6823 | 6823 | ||||
| WBsf116884 | 14640 | 14640 | ||||
| WBsf116885 | 26235 | 26235 | ||||
| WBsf132007 | 23525 | 23526 | ||||
| WBsf132500 | 7794 | 7793 | ||||
| WBsf204939 | 14964 | 14964 | ||||
| WBsf205266 | 84 | 84 | ||||
| WBsf205544 | 3424 | 3424 | ||||
| WBsf205545 | 6772 | 6772 | ||||
| WBsf206022 | 3420 | 3420 | ||||
| WBsf206549 | 3496 | 3496 | ||||
| WBsf206550 | 6823 | 6823 | ||||
| WBsf206551 | 14640 | 14640 | ||||
| WBsf207502 | 105 | 105 | ||||
| WBsf207503 | 3419 | 3419 | ||||
| WBsf207504 | 6829 | 6829 | ||||
| WBsf207505 | 26668 | 26668 | ||||
| WBsf208437 | 3427 | 3427 | ||||
| WBsf208438 | 3944 | 3944 | ||||
| WBsf208439 | 6769 | 6769 | ||||
| WBsf208806 | 3426 | 3426 | ||||
| WBsf209298 | 30345 | 30345 | ||||
| WBsf210085 | 6778 | 6778 | ||||
| WBsf210475 | 3885 | 3885 | ||||
| WBsf211149 | 3567 | 3567 | ||||
| WBsf211150 | 3881 | 3881 | ||||
| WBsf211151 | 6844 | 6844 | ||||
| WBsf211152 | 24376 | 24376 | ||||
| WBsf211574 | 172 | 172 | ||||
| WBsf216217 | 3432 | 3431 | ||||
| WBsf216218 | 6772 | 6771 | ||||
| WBsf216430 | 3424 | 3423 | ||||
| WBsf236016 | 26626 | 26749 | ||||
| WBsf236017 | 26626 | 26806 | ||||
| WBsf237641 | 233 | 97 | ||||
| WBsf237642 | 233 | 133 | ||||
| WBsf237643 | 233 | 150 | ||||
| WBsf237644 | 3631 | 3430 | ||||
| WBsf237645 | 3631 | 3587 | ||||
| WBsf237646 | 9593 | 9020 | ||||
| WBsf237647 | 9593 | 9472 | ||||
| WBsf237648 | 9593 | 9503 | ||||
| WBsf237649 | 9593 | 9564 | ||||
| WBsf258249 | 121 | 120 | ||||
| WBsf258250 | 3433 | 3432 | ||||
| WBsf258251 | 6773 | 6772 | ||||
| WBsf258252 | 9021 | 9020 | ||||
| WBsf260036 | 26810 | 26811 | ||||
| WBsf260037 | 26750 | 26751 | ||||
| WBsf278331 | 127 | 126 | ||||
| WBsf278489 | 116 | 115 | ||||
| WBsf278569 | 129 | 128 | ||||
| WBsf278801 | 126 | 125 | ||||
| WBsf279035 | 9037 | 9036 | ||||
| WBsf279040 | 6775 | 6774 | ||||
| WBsf279041 | 3434 | 3433 | ||||
| WBsf279228 | 28726 | 28727 | ||||
| WBsf279271 | 96 | 95 | ||||
| WBsf279489 | 3429 | 3428 | ||||
| WBsf636909 | 24492 | 24493 | ||||
| WBsf637033 | 28479 | 28480 | ||||
| WBsf637151 | 28465 | 28466 | ||||
| WBsf637457 | 28724 | 28725 | ||||
| WBsf637462 | 26725 | 26726 | ||||
| WBsf637973 | 28558 | 28559 | ||||
| WBsf638249 | 28609 | 28610 | ||||
| WBsf638297 | 30034 | 30035 | ||||
| WBsf639542 | 4652 | 4651 | ||||
| WBsf639918 | 3412 | 3411 | ||||
| WBsf640028 | 6788 | 6787 | ||||
| WBsf640043 | 6868 | 6867 | ||||
| WBsf640087 | 156 | 155 | ||||
| WBsf640177 | 8507 | 8506 | ||||
| WBsf640208 | 80 | 79 | ||||
| WBsf640267 | 6821 | 6820 | ||||
| WBsf640536 | 132 | 131 | ||||
| WBsf640579 | 6652 | 6651 | ||||
| WBsf640716 | 6606 | 6605 | ||||
| WBsf640717 | 9007 | 9006 | ||||
| WBsf641000 | 3464 | 3463 | ||||
| WBsf641161 | 14460 | 14459 | ||||
| WBsf641553 | 3501 | 3500 | ||||
| WBsf641636 | 6624 | 6623 | ||||
| WBsf641766 | 3480 | 3479 | ||||
| WBsf641767 | 8492 | 8491 | ||||
| WBsf641918 | 5130 | 5131 | ||||
| WBsf641919 | 5360 | 5361 | ||||
| WBsf642190 | 188 | 187 | ||||
| WBsf642733 | 5161 | 5162 | ||||
| WBsf642847 | 5350 | 5351 | ||||
| WBsf975445 | 395 | 394 | ||||
| WBsf975447 | 5357 | 5356 | ||||
| WBsf975448 | 6184 | 6183 | ||||
| WBsf975449 | 10732 | 10731 | ||||
| WBsf975450 | 15927 | 15926 | ||||
| WBsf975451 | 23525 | 23526 | ||||
| WBsf975452 | 25144 | 25143 | ||||
| WBsf975454 | 29657 | 29658 | ||||
| WBsf027955 | 22710 | 23913 | ||||
| WBsf552137 | 28764 | 29448 | ||||
| WBsf552153 | 6630 | 6765 | ||||
| WBsf552157 | 560 | 599 | ||||
| WBsf552340 | 31424 | 31564 | ||||
| WBsf552516 | 8678 | 9500 | ||||
| WBsf552958 | 3094 | 3319 | ||||
| WBsf553280 | 6278 | 8243 | ||||
| WBsf553288 | 28758 | 33056 | ||||
| WBsf553433 | 8505 | 9564 | ||||
| WBsf553668 | 4769 | 5408 | ||||
| WBsf555083 | 28840 | 33019 | ||||
| WBsf555090 | 5900 | 8148 | ||||
| WBsf555370 | 8513 | 9481 | ||||
| WBsf555670 | 4812 | 5215 | ||||
| WBsf555998 | 8500 | 9582 | ||||
| WBsf556185 | 3041 | 3642 | ||||
| WBsf556365 | 19319 | 19963 | ||||
| WBsf556937 | 6040 | 6560 | ||||
| WBsf557578 | 2474 | 2625 | ||||
| WBsf557738 | 2398 | 3687 | ||||
| WBsf557800 | 7077 | 9709 | ||||
| WBsf557964 | 6318 | 6848 | ||||
| WBsf558558 | 28736 | 29492 | ||||
| WBsf558707 | 23170 | 23439 | ||||
| WBsf558763 | 490 | 929 | ||||
| WBsf559586 | 213 | 404 | ||||
| WBsf560656 | 9056 | 9514 | ||||
| WBsf561415 | 9192 | 9513 | ||||
| WBsf561732 | 9259 | 9534 | ||||
| WBsf562210 | 13399 | 13434 | ||||
| WBsf562682 | 28687 | 29503 | ||||
| WBsf562695 | 2542 | 3880 | ||||
| WBsf562720 | 7937 | 9550 | ||||
| WBsf563082 | 23133 | 23481 | ||||
| WBsf563375 | 30237 | 30776 | ||||
| WBsf563521 | 5629 | 6862 | ||||
| WBsf564446 | 28861 | 29853 | ||||
| WBsf564522 | 2987 | 3485 | ||||
| WBsf565409 | 2466 | 3726 | ||||
| WBsf565596 | 8557 | 9597 | ||||
| WBsf566590 | 3115 | 3547 | ||||
| WBsf566713 | 28799 | 29495 | ||||
| WBsf567184 | 3115 | 3547 | ||||
| WBsf567340 | 28799 | 29495 | ||||
| WBsf567421 | 245 | 988 | ||||
| WBsf567627 | 8566 | 8986 | ||||
| WBsf567832 | 28677 | 29469 | ||||
| WBsf567858 | 8407 | 9514 | ||||
| WBsf568937 | 3124 | 3765 | ||||
| WBsf569011 | 9228 | 9589 | ||||
| WBsf569046 | 8614 | 9013 | ||||
| WBsf569730 | 7108 | 9572 | ||||
| WBsf569826 | 2584 | 3924 | ||||
| WBsf570515 | 18189 | 18921 | ||||
| WBsf571026 | 28752 | 29226 | ||||
| WBsf571456 | 3022 | 3514 | ||||
| WBsf571519 | 28825 | 29547 | ||||
| WBsf572325 | 8345 | 9483 | ||||
| WBsf572438 | 3168 | 3558 | ||||
| WBsf572767 | 2660 | 3977 | ||||
| WBsf572960 | 8678 | 9496 | ||||
| WBsf573288 | 18236 | 18486 | ||||
| WBsf573858 | 28070 | 34785 | ||||
| WBsf574448 | 8560 | 9473 | ||||
| WBsf574950 | 28865 | 29801 | ||||
| WBsf575258 | 28743 | 29400 | ||||
| WBsf576096 | 28847 | 29516 | ||||
| WBsf576829 | 2129 | 4598 | ||||
| WBsf577096 | 3100 | 3557 | ||||
| WBsf577445 | 28838 | 29473 | ||||
| WBsf577446 | 8541 | 9729 | ||||
| WBsf577948 | 28851 | 29621 | ||||
| WBsf578218 | 8536 | 8794 | ||||
| WBsf578785 | 2904 | 3805 | ||||
| WBsf579157 | 28841 | 33883 | ||||
| WBsf579730 | 3054 | 4152 | ||||
| WBsf579865 | 28773 | 29807 | ||||
| WBsf580022 | 8537 | 9378 | ||||
| WBsf580504 | 7361 | 8211 | ||||
| WBsf580582 | 6647 | 6652 | ||||
| WBsf581372 | 9092 | 9470 | ||||
| WBsf582099 | 5896 | 9763 | ||||
| WBsf582208 | 2984 | 4057 | ||||
| WBsf583009 | 18027 | 18865 | ||||
| WBsf583155 | 28810 | 29503 | ||||
| WBsf584512 | 23202 | 23451 | ||||
| WBsf585040 | 3064 | 3542 | ||||
| WBsf585174 | 595 | 677 | ||||
| WBsf585401 | 28764 | 29497 | ||||
| WBsf585623 | 2913 | 3484 | ||||
| WBsf586036 | 28172 | 29939 | ||||
| WBsf586523 | 28772 | 29551 | ||||
| WBsf587189 | 28880 | 29508 | ||||
| WBsf587909 | 8021 | 9526 | ||||
| WBsf589246 | 28841 | 29514 | ||||
| WBsf591644 | 28861 | 29066 | ||||
| WBsf591673 | 9177 | 9223 | ||||
| WBsf591708 | 12979 | 13025 | ||||
| WBsf593524 | 29382 | 29466 | ||||
| WBsf593900 | 8627 | 8698 | ||||
| WBsf595246 | 8182 | 9493 | ||||
| WBsf595587 | 3141 | 3553 | ||||
| WBsf596123 | 9385 | 9412 | ||||
| WBsf597467 | 2479 | 3562 | ||||
| WBsf597656 | 23129 | 23504 | ||||
| WBsf598001 | 8548 | 9602 | ||||
| WBsf598021 | 28746 | 29344 | ||||
| WBsf598801 | 18236 | 18447 | ||||
| WBsf599000 | 6006 | 6358 | ||||
| WBsf600306 | 9226 | 9489 | ||||
| WBsf982206 | 6992 | 8250 | ||||
| WBsf044503 | 5677 | 6708 | ||||
| WBsf044504 | 8171 | 9460 | ||||
| WBsf044505 | 23135 | 23822 | ||||
| WBsf044506 | 28037 | 29928 | ||||
| WBsf648347 | 23311 | 23386 | ||||
| WBsf654186 | 3229 | 3152 | ||||
| WBsf654187 | 3340 | 3328 | ||||
| WBsf654188 | 7835 | 7806 | ||||
| WBsf654189 | 8692 | 8577 | ||||
| WBsf654190 | 8897 | 8849 | ||||
| WBsf654191 | 8994 | 8981 | ||||
| WBsf655194 | 28940 | 28996 | ||||
| WBsf655682 | 6350 | 6267 | ||||
| WBsf663024 | 30706 | 30816 | ||||
| WBsf663025 | 30994 | 30994 | ||||
| WBsf670803 | 417 | 382 | ||||
| WBsf670804 | 693 | 687 | ||||
| WBsf670805 | 1779 | 1779 | ||||
| WBsf670806 | 3834 | 3808 | ||||
| WBsf670807 | 4967 | 4967 | ||||
| WBsf670808 | 8081 | 8069 | ||||
| WBsf670809 | 9421 | 9401 | ||||
| WBsf670810 | 16552 | 16444 | ||||
| WBsf690615 | 764 | 811 | ||||
| WBsf690616 | 1052 | 1054 | ||||
| WBsf690617 | 3306 | 3382 | ||||
| WBsf690618 | 5969 | 5986 | ||||
| WBsf690619 | 6395 | 6486 | ||||
| WBsf690620 | 6547 | 6547 | ||||
| WBsf690621 | 7981 | 7985 | ||||
| WBsf690622 | 8679 | 8748 | ||||
| WBsf690623 | 8962 | 8980 | ||||
| WBsf690624 | 9038 | 9082 | ||||
| WBsf690625 | 9372 | 9413 | ||||
| WBsf690626 | 29371 | 29431 | ||||
| WBsf712560 | 6059 | 5989 | ||||
| WBsf712561 | 23294 | 23177 | ||||
| WBsf712562 | 23941 | 23917 | ||||
| WBsf712563 | 28936 | 28859 | ||||
| WBsf712564 | 29322 | 29251 | ||||
| WBsf712565 | 29372 | 29360 | ||||
| WBsf712566 | 30486 | 30439 | ||||
| WBsf712567 | 30636 | 30602 | ||||
| WBsf712568 | 30692 | 30645 | ||||
| WBsf264187 | 30764 | 30867 | ||||
| WBsf267674 | 23846 | 24153 | ||||
| WBsf267675 | 24185 | 24338 | ||||
| Feature_data | K07E3:Polysome | 1 | 34851 | |||
| K07E3:TranscriptionallyActiveRegion | 1 | 34851 | ||||
| K07E3:ChIPSeqTF | 1 | 34851 | ||||
| K07E3:TRF | 1 | 34851 | ||||
| K07E3:Dust | 1 | 34851 | ||||
| K07E3:inverted | 1 | 34851 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | C02B8 | 31952 | ||||
| Overlap_left | C46F2 | |||||
| Clone_left_end | C02B8 | 31952 | ||||
| K07E3 | 1 | |||||
| Clone_right_end | C46F2 | 12315 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080274 | ||
| NDB_ID | _U41552 | |||||
| NDB_SV | FO080274.1 | |||||
| Secondary_accession | U41552 | |||||
| DB_remark | The 5' clone is C46F2, 200 bp overlap; the 3' clone is C02B8, 2900 bp overlap. Actual start of this clone is at base position 1 of K07E3; actual end is at 4315 of C02B8. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Latreille P | ||||
| Gattung S | ||||||
| From_laboratory | RW | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | K07E3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | da4d34186ec2524fa0070272200f48c8 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 09 Aug 2011 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -0.550963 | ||||
| Method | Genomic_canonical |
