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WormBase Tree Display for Gene: WBGene00276973

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Name Class

WBGene00276973SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameSequence_namePPA38604
Molecular_namePPA38604
PPA38604.1
PP69476
Public_namePPA38604
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003239.993From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.0691From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
8.21417From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00283335
00283336
00283337
00283338
00283339
OrthologWBGene00155071Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00030277Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00001816Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00127860Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g9829Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15704Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5897Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10041Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16608Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3378Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3757Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6238Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g29003Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3429Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7426Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00493.g11502Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-haf-6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2836Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2881Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16065Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00234.g7628Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16193Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002008Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10520Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20293Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10267300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00056327Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00266246Strongyloides rattiFrom_analysisWormBase-Compara
chrI_pilon.g168Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00089911Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090543Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090691Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092396Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093787Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095331Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095938Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095997Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096839Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098127Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099187Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103734Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103981Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105039Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106070Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106742Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111091Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113284Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113531Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113534Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113826Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114765Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117653Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273710Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273830Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274002Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275822Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277201Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277529Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277642Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278051Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278276Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278740Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279892Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280152Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280301Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280910Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281092Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281157Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281795Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00282011Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00284766Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans haf-6. In C. elegans, haf-6 is involved in regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA38604
Corresponding_transcriptPPA38604.1
Other_sequenceSR04874
Dviv_isotig20786
MCC02603_1
EX565987.1
PPC09380_1
Acan_isotig14914
EX564134.1
MC02251
EW743815.1
Dviv_isotig19711
Tcol_isotig16918
CRC02189_1
ACC15847_1
EX011105.1
ACC11313_1
Hbac_isotig05794
EY463528.1
Tcol_isotig13700
Oden_isotig20325
EY468703.1
FC814151.1
Tcol_isotig19751
Tcol_isotig19128
Tcol_isotig19406
ES413803.1
MCC00597_1
HC03111
EY458404.1
EX827636.1
EY458726.1
CR00801
Oden_isotig18208
SRC06365_1
Tcir_isotig17153
HCC01245_1
MC02168
FC544610.1
CJC06019_1
FC814140.1
ES740572.1
Acan_isotig10998
Tcol_isotig20425
BUC01717_1
Dviv_isotig20787
Experimental_infoMicroarray_resultsGPL14372_Probes_38722
GPL14372_Probes_38723
GPL14372_Probes_38724
GPL14372_Probes_38725
GPL14372_Probes_38726
GPL14372_Probes_38727
GPL14372_Probes_38728
GPL14372_Probes_38729
GPL14372_Probes_38730
GPL14372_Probes_38731
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene