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WormBase Tree Display for Gene: WBGene00096839

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Name Class

WBGene00096839SMapS_parentSequencePPA_ChrIV
IdentityVersion3
NameSequence_namePPA07285
Molecular_namePPA07285
PPA07285.1
PP55376
Other_nameGENEPREDICTION_SNAP300000063762
UMM-S233-16.9Person_evidenceWBPerson606
Public_namePPA07285
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
208 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-pgp-9
301 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000324.05077From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.3505From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
4.05077From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
6.13376From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176679
00176680
00176681
00176682
00176683
OrthologWBGene00247089Onchocerca volvulusFrom_analysisWormBase-Compara
CSP31.g18382Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2096Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g2098Caenorhabditis sulstoniFrom_analysisWormBase-Compara
Cang_2012_03_13_01197.g15954Caenorhabditis angariaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02404Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_40024600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA07285
Corresponding_transcriptPPA07285.1
Other_sequence (35)
Experimental_infoMicroarray_results (11)
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[191001 pad] The CGC name Ppa-pgp-9 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene