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WormBase Tree Display for Gene: WBGene00244713

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Name Class

WBGene00244713SMapS_parentSequenceOVOC_OM3_51
IdentityVersion2
NameCGC_nameOvo-unc-49From_analysisInferred_from_orthology
Sequence_nameOVOC7904
Molecular_nameOVOC7904
OVOC7904.1
OVP10821
Public_nameOvo-unc-49
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-unc-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000010112.985From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
7.92955From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:00001040.282865From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.893618From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.908374From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
13.3461From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
14.5374From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
2.19348From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
40.4547From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
4.53535From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
5.3496From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
6.65821From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
7.08662From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
80.5095From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
8.77249From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
8.96137From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
9.07849From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
9.96968From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
WBls:000010716.3647From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.1406From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
21.2439From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
24.0677From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
28.5233From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006642.65661From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.69075From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
2.72489From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00258500
00258501
00258502
00258503
00258504
00258505
OrthologWBGene00226151Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4077Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2957Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4858Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9433Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15299Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14165Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP39.g4330Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g435Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00203.g6909Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9604Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7354Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00128.g5093Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11417Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010456Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g4278Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4279Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30124920Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00055768Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g8887Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263155Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287048Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237099Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237197Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237404Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237738Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237784Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238131Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238252Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238596Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238864Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239151Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239264Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239539Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239927Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240829Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241047Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241625Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241742Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242375Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242690Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242805Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242818Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243247Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244055Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244108Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244412Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244711Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244812Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244971Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245073Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245975Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245976Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246028Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246301Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246695Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246750Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246847Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247158Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247343Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247467Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247539Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247540Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248030Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248763Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248811Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248832Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249318Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC7904
Corresponding_transcriptOVOC7904.1
Other_sequenceAA294204.1
AI436839.1
BF400355.1
OVC01230_1
OVC02217_1
Dviv_isotig01730
Dviv_isotig01731
JI474359.1
JI232321.1
Acan_isotig04961
CV200166.1
JI179400.1
HC08434
TV00546
JI173655.1
PVC01002_1
JI476202.1
JI475362.1
MHC00186_1
ACC13002_1
DIC00284_1
Acan_isotig11761
Dviv_isotig01729
JI475395.1
JI177388.1
GO252832.1
ASC09701_1
Dviv_isotig01732
BMC07330_1
AS12490
Dviv_isotig10472
SSC01585_1
FC552536.1
AY134444.1
JI464718.1
Acan_isotig12744
JI233161.1
FG586716.1
MA02996
DA03516
JI473398.1
MC01342
FC552504.1
CBC01280_1
DA05020
PVC01901_1
PT03076
MethodGene