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WormBase Tree Display for Gene: WBGene00241742

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Name Class

WBGene00241742SMapS_parentSequenceOVOC_OM2_49
IdentityVersion2
NameCGC_nameOvo-lgc-47From_analysisInferred_from_orthology
Sequence_nameOVOC4933
Molecular_nameOVOC4933
OVOC4933.1
OVP05950
Public_nameOvo-lgc-47
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-lgc-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:00001010.607181From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
2.01732From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (14)
WBls:00001073.29028From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081.86476From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
3.47146From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
3.76258From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
4.78703From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006645.2423From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
6.83755From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
8.43281From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00255666
00255667
00255668
00255669
00255670
00255671
Ortholog (30)
Paralog (46)
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC4933
Corresponding_transcriptOVOC4933.1
Other_sequence (16)
ReferenceWBPaper00051570
MethodGene