WormBase Tree Display for Gene: WBGene00237197

WBGene00237197 SMap: S_parent: Sequence: OVOC_OM1b_7
  Identity: Version: 2
    Name: CGC_name: Ovo-avr-14 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC388
      Molecular_name (17)
      Public_name: Ovo-avr-14
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:32 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:32 WBPerson4055 Name_change: CGC_name: Ovo-avr-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: avr
    RNASeq_FPKM: WBls:0000101 10.6749 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
        8.02442 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
      WBls:0000104 (16)
      WBls:0000107 12.4075 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 10.1702 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        10.9412 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        4.06001 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        8.39047 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
      WBls:0000664 16.8742 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        20.8755 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        24.8769 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00251029
      00251030
      00251031
      00251032
      00251033
      00251034
    Ortholog (45)
    Paralog (46)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans avr-14. In C. elegans, avr-14 is involved in several processes, including locomotion involved in locomotory behavior; regulation of pharyngeal pumping; and response to xenobiotic stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC388a
      OVOC388b
      OVOC388c
    Corresponding_CDS_history: OVOC388:ov242
    Corresponding_transcript (11)
    Other_sequence (79)
  Method: Gene