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WormBase Tree Display for Gene: WBGene00242690

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Name Class

WBGene00242690SMapS_parentSequenceOVOC_OM2_79
IdentityVersion2
NameCGC_nameOvo-lgc-39From_analysisInferred_from_orthology
Sequence_nameOVOC5881
Molecular_nameOVOC5881
OVOC5881.1
OVP02910
Public_nameOvo-lgc-39
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-lgc-39
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlgc
RNASeq_FPKMWBls:00001011.15302From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
4.03717From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.117894From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
0.283877From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.36269From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
10.5598From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
1.10596From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
1.20007From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
1.42372From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.64507From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
3.58355From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
6.03847From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
WBls:000010716.666From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010813.4742From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
13.8693From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
14.044From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
14.7884From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006641.73366From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
2.67188From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
3.61009From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00256596
00256597
00256598
00256599
00256600
00256601
OrthologWBGene00141609Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00038367Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00221853Brugia malayiFrom_analysisWormBase-Compara
WBGene00017314Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00124480Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g841Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9735Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16544Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1937Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6611Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18742Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7185Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6078Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23097Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7871Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21484Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00026.g1558Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-lgc-39Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15426Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01148.g18763Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09732Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017342Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05324Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10877Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50227900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00071811Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00107864Pristionchus pacificusFrom_analysisWormBase-Compara
chrV_pilon.g14617Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258149Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00237099Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237197Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237404Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237738Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237784Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238131Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238252Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238596Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238864Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239151Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239264Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239539Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239927Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240829Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241047Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241625Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241742Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242375Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242805Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242818Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243247Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244055Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244108Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244412Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244711Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244713Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244812Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244971Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245073Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245975Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245976Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246028Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246301Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246695Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246750Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246847Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247158Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247343Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247467Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247539Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247540Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248030Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248763Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248811Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248832Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249318Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-39.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC5881
Corresponding_transcriptOVOC5881.1
Other_sequenceBF727474.1
OVC08862_1
Oden_isotig10941
Dviv_isotig09706
Dviv_isotig09703
Oden_isotig10940
GR13499
FC545652.1
JI465522.1
EY465477.1
Acan_isotig08123
FC546076.1
EF619540.1
FC553540.1
Dviv_isotig09701
GT570964.1
ACC11131_1
GRC02695_1
Dviv_isotig09704
MethodGene