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WormBase Tree Display for Gene: WBGene00239539

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Name Class

WBGene00239539SMapS_parentSequenceOVOC_OM1b_117
IdentityVersion3
NameCGC_nameOvo-acr-8From_analysisInferred_from_orthology
Sequence_nameOVOC2730
Molecular_nameOVOC2730
OVOC2730.1
OVP13793
Public_nameOvo-acr-8
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-acr-8
328 May 2014 09:51:36WBPerson2062EventAcquires_mergeWBGene00239541
Acquires_mergeWBGene00239541
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacr
RNASeq_FPKMWBls:000010115.8052From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
9.58899From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:000010410.9802From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.25602From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
15.1443From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
15.7347From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
16.3493From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.92249From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
2.18508From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
3.58046From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
4.11181From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
4.90369From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
5.90898From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
7.22493From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
7.41961From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
7.72664From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
9.29533From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
9.88264From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
WBls:000010754.432From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010818.8734From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
28.0223From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
43.8054From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
84.5204From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066414.7106From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
22.9837From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
31.2569From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00253470
00253471
00253472
00253473
00253474
00253475
00253476
00253477
OrthologWBGene00139702Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00036931Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227660Brugia malayiFrom_analysisWormBase-Compara
WBGene00269182Brugia malayiFrom_analysisWormBase-Compara
WBGene00000047Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128161Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3004Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10338Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3152Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11936Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16021Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25172Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4021Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6025Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19573Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20287Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00065.g3190Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-acr-8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13743Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00005.g324Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01328Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023577Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01642Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20963Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0071520Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00058468Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00092568Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g19900Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258262Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288522Trichuris murisFrom_analysisWormBase-Compara
WBGene00289340Trichuris murisFrom_analysisWormBase-Compara
WBGene00297196Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237099Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237197Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237404Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237738Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237784Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238131Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238252Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238596Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238864Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239151Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239264Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239927Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240829Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241047Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241625Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241742Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242375Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242690Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242805Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242818Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243247Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244055Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244108Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244412Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244711Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244713Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244812Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244971Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245073Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245975Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245976Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246028Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246301Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246695Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246750Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246847Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247158Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247343Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247467Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247539Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247540Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248030Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248763Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248811Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248832Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249318Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC2730
Corresponding_CDS_historyOVOC2730:ov243
Corresponding_transcriptOVOC2730.1
Other_sequencePP01813
Oden_isotig20821
CK854865.1
WBC01521_1
EU006785.1
Dviv_isotig18238
FK801476.1
CJC15670_1
Tcol_isotig18701
JI179975.1
BXC00073_1
ACC22187_1
Dviv_isotig18237
HQ215518.1
CK726363.1
DI02188
PPC00827_1
DIC01557_1
JI167248.1
HS00332
HQ215517.1
JI173647.1
GU168769.1
HSC00302_1
MethodGene