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WormBase Tree Display for Gene: WBGene00238359

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Name Class

WBGene00238359SMapS_parentSequenceOVOC_OM1b_61
IdentityVersion2
NameCGC_nameOvo-unc-40From_analysisInferred_from_orthology
Sequence_nameOVOC1550
Molecular_nameOVOC1550
OVOC1550.1
OVP04334
Public_nameOvo-unc-40
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-unc-40
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001014.44211From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
8.92936From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.574776From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.924565From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
10.1429From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
10.3097From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
1.04617From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
1.06502From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
13.9214From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
16.3821From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
3.20632From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
37.9751From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
38.4147From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
4.40068From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
4.48354From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
6.09036From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
6.52076From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
9.49738From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
WBls:00001071.84671From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.3771From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
14.2961From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
17.4067From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
2.42836From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006641.71881From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.91114From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
4.10347From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00160417Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162859Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035291Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226094Brugia malayiFrom_analysisWormBase-Compara
WBGene00006776Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00126223Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210117Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00215004Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g10693Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6080Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6416Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9390Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g9393Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17082Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7666Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1487Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18061Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23251Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4203Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4204Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13295.g24171Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-40Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15165Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00491.g12060Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06376Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001309Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06699Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17054Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10282300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00060358Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113211Pristionchus pacificusFrom_analysisWormBase-Compara
chrI_pilon.g978Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262661Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297116Trichuris murisFrom_analysisWormBase-Compara
WBGene00301123Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00240739Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240740Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240871Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240957Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241187Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241854Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242189Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242200Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245200Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246535Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC1550
Corresponding_transcriptOVOC1550.1
Other_sequenceEX536364.1
MJ04383
JI164718.1
MJ04392
BMC01788
Oden_isotig09046
Dviv_isotig07003
Oden_isotig09047
JI461019.1
ES273149.1
JI215953.1
JI225605.1
DI01307
CRC04451_1
TX01227
CR08971
Dviv_isotig07005
ACC32859_1
JI472611.1
Dviv_isotig07004
Oden_isotig09048
XI01020
JI164672.1
CBC04695_1
MH05040
DVC00509_1
MH03374
ACC39883_1
JI481633.1
FC547675.1
Tcir_isotig14540
GO239978.1
FC554101.1
EX536506.1
Acan_isotig08978
EV852868.1
MJ04378
CR00445
JI475535.1
DIC00851_1
JI460889.1
TX01264
Dviv_isotig07002
JI211837.1
Tcol_isotig20894
ACC26951_1
BMC10040_1
MJ04394
MethodGene