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WormBase Tree Display for Gene: WBGene00060358

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Name Class

WBGene00060358SMapS_parentSequenceCrem_Contig11
IdentityVersion3
NameCGC_nameCre-unc-40From_analysisInferred_from_orthology
Sequence_nameCRE03833
Molecular_nameCRE03833
CRE03833.1
RP26668
Other_namecr01.sctg18.wum.4
Public_nameCre-unc-40
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:42WBPerson2970Name_changeCGC_nameCre-unc-40
303 Jul 2008 11:45:32WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03833
Other_namecr01.sctg18.wum.4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000004105.876From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
108.311From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
110.746From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002725.4294From_analysisRNASeq.remanei.WBls:0000027.control_mean
30.6683From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
31.4039From_analysisRNASeq.remanei.WBls:0000027.control_median
32.1396From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
34.5996From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.31005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003814.9753From_analysisRNASeq.remanei.WBls:0000038.control_mean
18.3877From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
20.7639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
5.77426From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004124.5153From_analysisRNASeq.remanei.WBls:0000041.control_median
25.1971From_analysisRNASeq.remanei.WBls:0000041.control_mean
41.2531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
42.2987From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
45.2615From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
7.18788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
7.4043From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
7.77745From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010118.5161From_analysisRNASeq.remanei.total_over_all_stages.control_median
26.0376From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (35)
Paralog (28)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03833
Corresponding_transcriptCRE03833.1
Other_sequence (34)
Experimental_infoExpr_patternExpr1093157
Microarray_resultsGPL14146_CRE03833_2680-2739_0.825_88_B
GPL14146_CRE03833_3022-3081_0.858_56_A
GPL14146_CRE03833_3911-3970_0.554_654_C
MethodGene