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WormBase Tree Display for Gene: WBGene00242200

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Name Class

WBGene00242200SMapS_parentSequenceOVOC_OM2_65
IdentityVersion2
NameSequence_nameOVOC5391
Molecular_nameOVOC5391
OVOC5391.1
OVP13447
OVOC5391.2
Public_nameOVOC5391
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
209 Mar 2015 14:13:27WBPerson2062EventAcquires_mergeWBGene00242201
Acquires_mergeWBGene00242201
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010110.5378From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
9.0772From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:000010712.1258From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010823.3308From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
28.7751From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
31.4217From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
9.79549From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066415.1548From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
20.9333From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
9.37625From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Ortholog (34)
ParalogWBGene00238359Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240739Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240740Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240871Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240957Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241187Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241854Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242189Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245200Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246535Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; Immunoglobulin V-set domain; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC5391
Corresponding_CDS_historyOVOC5391:ov242
Corresponding_transcriptOVOC5391.1
OVOC5391.2
Other_sequence (42)
MethodGene