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WormBase Tree Display for Gene: WBGene00158628

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Name Class

WBGene00158628SMapS_parentSequenceCbre_Contig54
IdentityVersion1
NameCGC_nameCbn-unc-86From_analysisInferred_from_orthology
Sequence_nameCBN19903
Molecular_nameCBN19903
CBN19903.1
CN15651
Other_nameCBN19903
Public_nameCbn-unc-86
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-86
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020.701735From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.922505From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
1.11713From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
1.4956From_analysisRNASeq.brenneri.WBls:0000002.control_median
1.87407From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.10402From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.01627From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
3.74667From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
4.02773From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
5.63409From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:00000040.494966From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.989932From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002411.2722From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
13.8632From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
14.7125From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
15.3861From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.6394From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000380.139345From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.278691From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410.310319From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0.341459From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.393733From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.529931From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
0.753066From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
1.26717From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
1.52675From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.57104From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
RNASeq.brenneri.WBls:0000041.control_median
WBls:00001010.310319From_analysisRNASeq.brenneri.total_over_all_stages.control_median
0.922857From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00218267
00218268
00218269
OrthologWBGene00006818Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036542Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00054771Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00118128Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00177265Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00217665Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g5679Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1851Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11520Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16464Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g18925Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1764Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20335Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g146Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8217Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-86Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold78.g488Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00014.g941Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19673Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009775Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09391Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22052Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30231100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00228776Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8328Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244854Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261536Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286844Trichuris murisFrom_analysisWormBase-Compara
WBGene00295957Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139615Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00146096Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00156712Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-86. In C. elegans, unc-86 is involved in mechanosensory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN19903
Corresponding_transcriptCBN19903.1
Other_sequenceAcan_isotig06105
Dviv_isotig17894
Oden_isotig25490
Oden_isotig25565
Dviv_isotig17893
Acan_isotig06104
Dviv_isotig21248
XIC02391_1
XI03029
JI170316.1
Experimental_infoMicroarray_resultsGPL14142_CBN19903_465-524_0.876_35_C
GPL14142_CBN19903_644-703_0.928_2_A
GPL14142_CBN19903_883-942_0.910_9_B
MethodGene