WormBase Tree Display for Gene: WBGene00139615

WBGene00139615 SMap: S_parent: Sequence: Cbre_Contig726
  Identity: Version: 2
    Name: CGC_name: Cbn-ceh-6.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN00890
      Molecular_name: CBN00890
        CBN00890.1
        CN21647
      Other_name: CBN00890
        Cbn-ceh-6 From_analysis: Inferred_from_orthology
      Public_name: Cbn-ceh-6.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ceh-6
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-ceh-6.1
                Other_name: Cbn-ceh-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceh
    RNASeq_FPKM: WBls:0000002 0.187963 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.65496 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.757987 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.861015 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.16543 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.31464 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.62421 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.81522 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        4.19632 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
      WBls:0000004 0.692365 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.38473 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        4.64291 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        4.94984 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        5.43431 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        5.9706 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        6.41295 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 0.416893 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        0.806642 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        1.19639 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (12)
      WBls:0000101 0.416893 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        0.839763 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00202827
      00202828
      00202829
    Ortholog (30)
    Paralog: WBGene00158628 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00146096 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00156712 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans ceh-6. In C. elegans, ceh-6 is involved in transdifferentiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN00890
    Corresponding_transcript: CBN00890.1
    Other_sequence: CRC06041_1
      Tcir_isotig27799
      Acan_isotig09977
      Oden_isotig19268
  Experimental_info: Microarray_results: GPL14142_CBN00890_658-717_0.906_8_A
      GPL14142_CBN00890_751-810_0.868_28_B
  Method: Gene