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WormBase Tree Display for Gene: WBGene00054771

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Name Class

WBGene00054771SMapS_parentSequenceCrem_Contig7
IdentityVersion3
NameCGC_nameCre-unc-86From_analysisInferred_from_orthology
Sequence_nameCRE25126
Molecular_nameCRE25126
CRE25126.1
RP34636
Other_namecr01.sctg4.wum.127
Public_nameCre-unc-86
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-unc-86
303 Jul 2008 11:44:51WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE25126
Other_namecr01.sctg4.wum.127
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000044.76147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
5.24824From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
5.735From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000270.358139From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
11.7399From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.16305From_analysisRNASeq.remanei.WBls:0000027.control_mean
7.41711From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
8.27709From_analysisRNASeq.remanei.WBls:0000027.control_median
9.13706From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.624018From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
0.671586From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.39074From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000410.527054From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.985011From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.13801From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.25885From_analysisRNASeq.remanei.WBls:0000041.control_median
1.31967From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.3797From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.80361From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.08466From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:00000630.163593From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0.518371From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
0.548827From_analysisRNASeq.remanei.WBls:0000063.control_median
0.579282From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.589955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0.619607From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.893452From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
1.24602From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
2.2054From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
WBls:00001010.939232From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.12606From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00150088
00150089
00150090
Ortholog (29)
ParalogWBGene00051914Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00064253Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-86. In C. elegans, unc-86 is involved in mechanosensory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25126
Corresponding_transcriptCRE25126.1
Other_sequenceAcan_isotig06105
Dviv_isotig17894
Oden_isotig25490
Oden_isotig25565
Dviv_isotig17893
Acan_isotig06104
Dviv_isotig21248
XIC02391_1
XI03029
JI170316.1
Experimental_infoExpr_patternExpr1109062
Microarray_resultsGPL14146_CRE25126_422-481_0.896_13_C
GPL14146_CRE25126_576-635_0.909_7_A
GPL14146_CRE25126_826-885_0.951_1_B
MethodGene