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WormBase Tree Display for Gene: WBGene00148896

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Name Class

WBGene00148896SMapS_parentSequenceCbre_Contig0
IdentityVersion2
NameSequence_nameCBN10171
Molecular_nameCBN10171
CBN10171.1
CN22287
Other_nameCBN10171
Public_nameCBN10171
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-rgs-7
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000211.4654From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
3.87908From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
4.33657From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
5.62659From_analysisRNASeq.brenneri.WBls:0000002.control_mean
6.98234From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
6.98759From_analysisRNASeq.brenneri.WBls:0000002.control_median
6.99284From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
7.30999From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
7.47426From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
7.8254From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:0000004117.121From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
18.37From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
215.873From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002410.3664From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
10.8852From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
11.0971From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
12.0407From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
12.8993From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000384.38815From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
4.52292From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.6577From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004110.7015From_analysisRNASeq.brenneri.WBls:0000041.control_mean
10.8764From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
15.9192From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
1.80505From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
21.2974From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
4.59869From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
4.71729From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
4.89461From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
5.41323From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
5.50606From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
5.83719From_analysisRNASeq.brenneri.WBls:0000041.control_median
6.16832From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
64.7441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
7.50502From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
8.8069From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
8.97192From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
WBls:000010115.1864From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
6.16832From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00004347Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004350Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00004351Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004352Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004353Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00004354Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021988Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00051966Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00059606Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00129549Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00132514Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
CBOVI.g3132Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10921Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3894Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10460Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g8981Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5052Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15633Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g25474Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16250Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00024.g1464Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18187Caenorhabditis tropicalisFrom_analysisWormBase-Compara
FL83_00819Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024115Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01358Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0268900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00034799Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224721Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18773Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238802Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00305150Pristionchus pacificusFrom_analysisWormBase-Compara
ParalogWBGene00140926Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00142203Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00147994Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00159066Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151582Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00139124Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144390Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00144797Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151556Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192446Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194425Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00163868Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RGS domain; RGS domain superfamily; and Regulator of G protein signaling domain. Is an ortholog of C. elegans rgs-7; rgs-10; and rgs-11.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN10171
Corresponding_transcriptCBN10171.1
Other_sequencePP01804
Acan_isotig02910
EX546327.1
Hbac_isotig04349
EX566353.1
Acan_isotig02911
EY465298.1
Acan_isotig05414
EY465766.1
EX912667.1
JI166735.1
Acan_isotig05415
EY466704.1
EX553851.1
ACC23944_1
HBC26737_1
ACC34384_1
ACC11150_1
Experimental_infoMicroarray_resultsGPL14142_CBN10171_536-595_0.934_2_C
GPL14142_CBN10171_621-680_0.673_80_A
GPL14142_CBN10171_836-895_0.724_60_B
Remark[180319 gw3] The CGC name Cbn-rgs-7 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene