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WormBase Tree Display for Gene: WBGene00144569

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Name Class

WBGene00144569SMapS_parentSequenceCbre_Contig537
IdentityVersion2
NameCGC_nameCbn-phat-5.2From_analysisInferred_from_orthology
Sequence_nameCBN05844
Molecular_nameCBN05844
CBN05844.1
CN14777
Public_nameCbn-phat-5.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-phat-5.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classphat
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002414.596From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
19.4628From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
39.5295From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
5.9748From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
8.93453From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000380From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
RNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
WBls:00000410.240863From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.241648From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.764653From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
1.0682From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.79266From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0From_analysis (13)
WBls:00001010.694576From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00020239Caenorhabditis elegansFrom_analysisOMA
WBGene00020240Caenorhabditis elegansFrom_analysisOMA
WBGene00020241Caenorhabditis elegansFrom_analysisOMA
WBGene00020242Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00031809Caenorhabditis briggsaeFrom_analysisOMA
WBGene00080871Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00095436Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00095602Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
Paralog (47)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. Is an ortholog of C. elegans phat-5. In C. elegans, phat-5 is involved in pharyngeal gland morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05844
Corresponding_transcriptCBN05844.1
Other_sequenceCJC08017_1
Experimental_infoMicroarray_resultsGPL14142_CBN05844_498-557_0.939_5_A
MethodGene