Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00139798

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00139798SMapS_parentSequenceCbre_Contig739
IdentityVersion2
NameCGC_nameCbn-unc-25From_analysisInferred_from_orthology
Sequence_nameCBN01073
Molecular_nameCBN01073
CBN01073.1
CN09860
Public_nameCbn-unc-25
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-unc-25
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020.873132From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
18.4054From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.22925From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
3.25425From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
3.27459From_analysisRNASeq.brenneri.WBls:0000002.control_median
3.29493From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
4.47036From_analysisRNASeq.brenneri.WBls:0000002.control_mean
4.56839From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
4.92368From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
7.15461From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.41242From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
3.42147From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
5.36081From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
5.49702From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
5.58767From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:00000380.779441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
1.0225From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
1.26555From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000411.16187From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
1.17854From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
1.24326From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
1.44683From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
1.46588From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
1.54958From_analysisRNASeq.brenneri.WBls:0000041.control_median
1.63328From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
1.97289From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.27415From_analysisRNASeq.brenneri.WBls:0000041.control_mean
2.75062From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
3.54189From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
3.78794From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
4.41665From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
4.70709From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
7.07966From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
WBls:00001011.46588From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.68178From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00202979
00202980
00202981
OrthologWBGene00006762Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035897Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00063466Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00114297Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g4310Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4866Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16779Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1869Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10463Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5781Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5854Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8160Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2906Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14983Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00058.g2945Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00996.g15284Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13386.g24206Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-25Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18023Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00767.g15293Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14491Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010984Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03728Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03730Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1066Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g6908Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30292500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226652Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g9265Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246178Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00260019Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261020Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00141527Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00145841Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00148201Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00151479Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00155014Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156977Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158798Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00164743Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190314Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191203Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191247Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193582Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194138Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans unc-25. In C. elegans, unc-25 is involved in GABAergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN01073
Corresponding_transcriptCBN01073.1
Other_sequenceCBC15380_1
FG354202.1
Hbac_isotig05684
EY468138.1
SS03390
FD517376.1
ACC21130_1
EY458874.1
SRC00739_1
FC540155.1
Oden_isotig21386
CSC00871_1
MHC03583_1
Oden_isotig09325
FD515510.1
EY460063.1
EY466600.1
EY466724.1
Oden_isotig09328
EY460608.1
SR01983
EY471474.1
AE04227
Tcol_isotig07709
EY462382.1
ACC07904_1
EY468820.1
ACC27001_1
EY469312.1
AYC03134_1
Acan_isotig06495
EY467451.1
Tcol_isotig16685
FC816436.1
ACC07095_1
FC540207.1
EY473675.1
SSC03394_1
MH01102
FC542731.1
CSC01592_1
EY465784.1
Tcir_isotig15935
MethodGene