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WormBase Tree Display for Gene: WBGene00035897

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Name Class

WBGene00035897SMapS_parentSequencecb25.fpc4030a2
IdentityVersion2
NameCGC_nameCbr-unc-25From_analysisInferred_from_orthology
Sequence_nameCBG15755
Molecular_nameCBG15755
CBG15755.1
CBP03839
Other_nameCBG_15755Accession_evidenceNDBHE600979
Public_nameCbr-unc-25
DB_infoDatabaseNDBlocus_tagCBG_15755
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-25
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000221.0103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
23.819From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.1203From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.5316From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.3445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
22.4146From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.1763From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.83622From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.67244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.733405From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.801948From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000043.03789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
3.19959From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
3.36129From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
3.09036From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
3.42419From_analysisRNASeq.briggsae.WBls:0000004.control_mean
3.6041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
4.02732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:000002710.5429From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.0627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.14221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
9.42385From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.7433From_analysisRNASeq.briggsae.WBls:0000027.control_median
21.3458From_analysisRNASeq.briggsae.WBls:0000027.control_mean
53.7546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003553.649From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003823.1823From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
23.6944From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.2593From_analysisRNASeq.briggsae.WBls:0000038.control_median
31.3363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
35.3949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.86396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004110.667From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.6323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
14.5006From_analysisRNASeq.briggsae.WBls:0000041.control_mean
28.2973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.37104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.7017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.9312From_analysisRNASeq.briggsae.WBls:0000041.control_median
17.2191From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.2301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
23.0822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000633.60488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.4763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.6454From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.13887From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.91978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.04797From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
13.5307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
5.28259From_analysisRNASeq.briggsae.WBls:0000063.control_median
6.53751From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010117.0387From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
9.7017From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.667From_analysisRNASeq.briggsae.total_over_all_stages.control_median
16.6453From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139352
00139353
00139354
Ortholog (33)
ParalogWBGene00024028Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028506Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030647Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031909Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034615Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036903Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037453Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038467Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042089Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans unc-25. In C. elegans, unc-25 is involved in GABAergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15755
Corresponding_CDS_historyCBG15755:bp194
Corresponding_transcriptCBG15755.1
Other_sequence (63)
Experimental_infoExpr_patternExpr1064305
Microarray_resultsGPL8303_CB6_WBGene00035897_A
GPL8303_CB6_WBGene00035897_B
GPL14143_CBG15755_1142-1201_0.942_1_A
ReferenceWBPaper00038509
WBPaper00046856
MethodGene