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WormBase Tree Display for Gene: WBGene00130395

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Name Class

WBGene00130395SMapS_parentSequenceCjap.Contig14827
IdentityVersion9
NameCGC_nameCjp-nhr-79.1From_analysisInferred_from_orthology
Sequence_nameCJA11191
Molecular_nameCJA11191
CJA11191.1
JA44953
CJA11191.2
Other_nameCjp-nhr-79From_analysisInferred_from_orthology
Public_nameCjp-nhr-79.1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-nhr-79
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCjp-nhr-79.1
Other_nameCjp-nhr-79
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:27WBPerson1983Name_changeCGC_nameCjp-nhr-79.1
601 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameRemoved
727 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameCjp-nhr-79.1
828 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
928 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-nhr-79.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000049.10473From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.60892From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.095From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
6.69018From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
8.39259From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
WBls:000004112.5111From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
12.6716From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
5.86155From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
6.47956From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
6.48491From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
7.30745From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
7.63898From_analysisRNASeq.japonica.WBls:0000041.control_median
7.9705From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
8.56945From_analysisRNASeq.japonica.WBls:0000041.control_mean
9.26896From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:00001017.9705From_analysisRNASeq.japonica.total_over_all_stages.control_median
8.00419From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00195568
00195569
00195570
00195571
OrthologWBGene00190811Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039504Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039505Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223242Brugia malayiFrom_analysisWormBase-Compara
WBGene00003669Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g2042Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g7922Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5793Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19330Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g351Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2534Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2530Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28685Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12001Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00294.g8656Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21640Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold621.g6172Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_04197.g32325Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04175Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_021557Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50418600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00075431Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g17833Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242085Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288616Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00119327Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00119542Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00119766Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00119838Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00119968Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120313Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120496Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120567Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00121360Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00121931Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122418Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122685Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122776Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123193Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123519Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123618Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123728Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123976Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124216Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124337Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124455Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124484Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124734Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125220Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125311Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126310Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126433Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126594Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127401Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127569Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127893Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128037Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128550Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128653Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128868Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128901Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129305Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129339Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129780Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130338Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130502Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130736Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131487Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131954Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132662Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132850Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133329Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133804Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133815Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133848Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133880Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134540Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134864Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135326Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135502Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135540Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135839Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135988Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136086Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136333Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136603Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136697Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136726Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136773Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137481Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137511Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137651Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137748Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137842Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138394Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138649Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138671Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138693Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00175273Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00177303Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00179670Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00183639Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00184480Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00184490Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207132Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207388Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208698Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209316Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209318Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209494Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210017Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212067Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212224Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212308Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213152Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213623Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214267Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214589Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00215732Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216057Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216710Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216790Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217088Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217117Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217407Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217596Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218378Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218448Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218786Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219027Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-79.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA11191
Corresponding_transcriptCJA11191.1
CJA11191.2
Other_sequenceCJC00467_1
Experimental_infoExpr_patternExpr1089455
Microarray_resultsGPL14145_CJA11191_532-591_0.957_1_A
Remark[190208 pad] The CGC name Cjp-nhr-79.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[191001 pad] The CGC name Cjp-nhr-79.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cjp-nhr-79.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene