WormBase Tree Display for Gene: WBGene00135988

WBGene00135988 SMap: S_parent: Sequence: Cjap.Contig17230
  Identity: Version: 9
    Name: CGC_name: Cjp-nhr-121.1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16783
      Molecular_name: CJA16783
        CJA16783.1
        JA60693
      Public_name: Cjp-nhr-121.1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 27 Jan 2009 12:59:25 WBPerson4055 Name_change: CGC_name: Cjp-nhr-121
        3 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-nhr-121.1
                Other_name: Cjp-nhr-121
        5 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        6 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cjp-nhr-121.1
        7 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Cjp-nhr-121
                Other_name: Cjp-nhr-121.1
        8 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        9 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-nhr-121.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 11.9102 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 5.28525 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.87335 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        4.54909 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        5.22482 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.6821 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        15.7375 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        25.6078 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        28.1786 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        3.73179 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        6.17029 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        6.62122 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        7.36745 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        7.70476 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        8.04208 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 6.62122 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        9.82695 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (31)
    Paralog (105)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Nuclear hormone receptor-like domain superfamily; Ligand-binding domain of nuclear hormone receptor; and Nuclear hormone receptor, ligand-binding domain. Is an ortholog of C. elegans nhr-121. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16783
    Corresponding_transcript: CJA16783.1
    Other_sequence: BMC17967_1
      Acan_isotig06947
      Acan_isotig06946
  Experimental_info: Expr_pattern: Expr1078265
    Microarray_results: GPL14145_CJA16783_996-1055_0.920_6_A
  Remark: [190208 pad] The CGC name Cjp-nhr-121.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Cjp-nhr-121 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00215732 Curator_confirmed: WBPerson1983
    Removed duplicate Other_name Cjp-nhr-121.1 Curator_confirmed: WBPerson1983
  Method: Gene