WormBase Tree Display for Gene: WBGene00123849

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WBGene00123849	SMap	S_parent	Sequence	Cjap.Contig17999
	Identity	Version	3
		Name	CGC_name	Cjp-sac-1	From_analysis	Inferred_from_orthology
			Sequence_name	CJA04646
			Molecular_name	CJA04646
				CJA04646.1
				JA02111
			Public_name	Cjp-sac-1
		Species	Caenorhabditis japonica
		History	Version_change	1	29 Aug 2008 14:34:20	WBPerson4055	Event	Imported	NGASP import
				2	29 Jul 2011 11:13:37	WBPerson4055	Event	Imported	Augustus import
				3	20 Mar 2018 10:26:12	WBPerson4025	Name_change	CGC_name	Cjp-sac-1
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	sac
		RNASeq_FPKM	WBls:0000004	30.8429	From_analysis	RNASeq.japonica.WBls:0000004.control_mean
						RNASeq.japonica.WBls:0000004.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
			WBls:0000027	22.3887	From_analysis	RNASeq.japonica.WBls:0000027.control_mean
						RNASeq.japonica.WBls:0000027.control_median
						RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
			WBls:0000038	17.189	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
				17.9867	From_analysis	RNASeq.japonica.WBls:0000038.control_mean
						RNASeq.japonica.WBls:0000038.control_median
				18.7845	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
			WBls:0000041	17.5036	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
				20.4669	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
				31.6795	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
				33.6715	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
				34.6349	From_analysis	RNASeq.japonica.WBls:0000041.control_median
				35.5983	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
				36.047	From_analysis	RNASeq.japonica.WBls:0000041.control_mean
				46.6788	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
				50.7717	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
				52.0055	From_analysis	RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
			WBls:0000101	29.0447	From_analysis	RNASeq.japonica.total_over_all_stages.control_mean
				30.8429	From_analysis	RNASeq.japonica.total_over_all_stages.control_median
		GO_annotation	00190404
		Ortholog	WBGene00009264	Caenorhabditis elegans	From_analysis	TreeFam
						Inparanoid_8
			WBGene00042594	Caenorhabditis briggsae	From_analysis	Inparanoid_8
						WormBase-Compara
			WBGene00085850	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00162968	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00192008	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			CSP26.g19119	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g20983	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g4812	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP32.g8313	Caenorhabditis sulstoni	From_analysis	WormBase-Compara
			CSP39.g14743	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g661	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cni-sac-1	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Csp11.Scaffold629.g14904	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp5_scaffold_00089.g3934	Caenorhabditis sinica	From_analysis	WormBase-Compara
			FL83_11555	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_000467	Caenorhabditis remanei	From_analysis	WormBase-Compara
			Pan_g12148	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_10071200	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			WBGene00272030	Pristionchus pacificus	From_analysis	WormBase-Compara
			WBGene00261774	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00288552	Trichuris muris	From_analysis	WormBase-Compara
		Paralog	WBGene00119730	Caenorhabditis japonica	From_analysis	TreeFam
						WormBase-Compara
			WBGene00132030	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00132973	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00181203	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00208053	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00208640	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00211286	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00212894	Caenorhabditis japonica	From_analysis	WormBase-Compara
		Structured_description	Automated_description	Predicted to enable phosphatase activity. Is an ortholog of C. elegans sac-1.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CJA04646
		Corresponding_transcript	CJA04646.1
		Other_sequence	JI482958.1
			Acan_isotig20376
			RS05779
			GO252851.1
			Tcir_isotig25983
			MH05992
			EX538178.1
			Tcol_isotig04266
			Name_isotig02899
			Dviv_contig09505
			CBC03074_1
			JI171088.1
			Tcir_isotig28878
			Oden_isotig18693
			GP00238
			Tcir_isotig06958
			FC548684.1
			RSC01962_1
			FC553406.1
			FC543215.1
			Name_isotig04946
			FC548758.1
			MHC02538_1
			CBC08082_1
			Hbac_isotig04527
			FC553467.1
			Acan_isotig10084
			ACC12568_1
			GPC03133_1
			EX559845.1
	Experimental_info	Expr_pattern	Expr1085872
		Microarray_results	GPL14145_CJA04646_1048-1107_0.865_21_C
			GPL14145_CJA04646_1409-1468_0.870_19_B
			GPL14145_CJA04646_1530-1589_0.929_3_A
	Method	Gene