WormBase Tree Display for Gene: WBGene00080437

expand all nodes | collapse all nodes | view schema

WBGene00080437	SMap	S_parent	Sequence	Crem_Contig18
	Identity	Version	2
		Name	CGC_name	Cre-srp-5.3	From_analysis	Inferred_from_orthology
			Sequence_name	CRE10963
			Molecular_name	CRE10963
				CRE10963.1
				RP35878
			Public_name	Cre-srp-5.3
		Species	Caenorhabditis remanei
		History	Version_change	1	03 Jul 2008 11:46:53	WBPerson4055	Event	Created
				2	20 Mar 2018 10:26:12	WBPerson4025	Name_change	CGC_name	Cre-srp-5.3
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	srp
		RNASeq_FPKM	WBls:0000004	0.469635	From_analysis	RNASeq.remanei.WBls:0000004.control_mean
						RNASeq.remanei.WBls:0000004.control_median
				0.939271	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
			WBls:0000024	0.178448	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
				0.289936	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
				0.535144	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
				0.580579	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
				0.836651	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
				0.920943	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
				1.01699	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
				0	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
				2.83134	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
			WBls:0000027	0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
						RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
						RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
						RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
						RNASeq.remanei.WBls:0000027.control_mean
						RNASeq.remanei.WBls:0000027.control_median
			WBls:0000038	0.216622	From_analysis	RNASeq.remanei.WBls:0000038.control_mean
				0.252146	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
						RNASeq.remanei.WBls:0000038.control_median
				0.397721	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
			WBls:0000041	0.06003	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
				0.063287	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
				0.080808	From_analysis	RNASeq.remanei.WBls:0000041.control_median
				0.085455	From_analysis	RNASeq.remanei.WBls:0000041.control_mean
				0.09833	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
				0.133939	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
				0.157144	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
			WBls:0000063	0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
						RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
						RNASeq.remanei.WBls:0000063.control_mean
						RNASeq.remanei.WBls:0000063.control_median
			WBls:0000101	0.080841	From_analysis	RNASeq.remanei.total_over_all_stages.control_mean
				0	From_analysis	RNASeq.remanei.total_over_all_stages.control_median
		Ortholog	WBGene00005646	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00284862	Caenorhabditis briggsae	From_analysis	WormBase-Compara
			Cnig_chr_IV.g15151	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Cnig_chr_IV.g15154	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			FL83_21404	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_015047	Caenorhabditis remanei	From_analysis	WormBase-Compara
		Paralog	WBGene00080449	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00080563	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00059144	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00059885	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00068406	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00068407	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00073344	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00075455	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080444	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080445	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080447	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080455	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080477	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00084574	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00084576	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
		Structured_description	Automated_description	Is predicted to encode a protein with the following domains: Serpin (serine protease inhibitor); Serpin domain; and Serpin superfamily. Is an ortholog of C. elegans srp-5.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CRE10963
		Corresponding_transcript	CRE10963.1
	Method	Gene