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WormBase Tree Display for Gene: WBGene00060001

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Name Class

WBGene00060001SMapS_parentSequenceCrem_Contig9
IdentityVersion3
NameCGC_nameCre-sup-17From_analysisInferred_from_orthology
Sequence_nameCRE29549
Molecular_nameCRE29549
CRE29549.1
RP47424
Other_namecr01.sctg16.wum.171
Public_nameCre-sup-17
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-sup-17
303 Jul 2008 11:45:30WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29549
Other_namecr01.sctg16.wum.171
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsup
RNASeq_FPKMWBls:0000004101.033From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
102.445From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
103.857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:000002410.7449From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
11.6154From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
11.6841From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
11.8266From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
11.8863From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
12.1215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
12.2802From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
12.3179From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
12.3659From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
13.531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
13.8452From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
14.1997From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
14.2935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
14.9227From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
15.1044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
15.1633From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
15.457From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
15.9587From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
16.0606From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
16.1969From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
16.35From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
17.0934From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
17.7554From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
17.9971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
18.1165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
18.2145From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
18.245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
18.4646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
18.6917From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
18.846From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
19.0298From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
19.8212From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
19.8415From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
19.8654From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
19.8689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
20.0101From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
20.1062From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
20.3857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
20.4715From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
20.6842From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
20.7988From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
21.5521From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
22.0858From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
22.3795From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
22.7525From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
22.8046From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
22.9738From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
23.0164From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
27.6127From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
27.6879From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
33.0142From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
4.09699From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
9.57856From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
WBls:000002725.0388From_analysisRNASeq.remanei.WBls:0000027.control_mean
27.1672From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
29.1747From_analysisRNASeq.remanei.WBls:0000027.control_median
31.1821From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
31.8755From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
9.9305From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003816.9335From_analysisRNASeq.remanei.WBls:0000038.control_mean
21.0215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
21.5255From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
8.25358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004143.708From_analysisRNASeq.remanei.WBls:0000041.control_median
44.3178From_analysisRNASeq.remanei.WBls:0000041.control_mean
7.65048From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
77.5591From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
78.9562From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
83.3846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
8.49937From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
9.85684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:000006313.2948From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
13.3747From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
17.0296From_analysisRNASeq.remanei.WBls:0000063.control_median
17.6379From_analysisRNASeq.remanei.WBls:0000063.control_mean
20.6845From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
23.9314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
24.5385From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
26.0662From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
29.5183From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
7.83871From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
8.09893From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
9.0333From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
WBls:000010121.2735From_analysisRNASeq.remanei.total_over_all_stages.control_median
30.6974From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00155483
OrthologWBGene00006324Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033327Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00158824Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00151753Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112423Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00130009Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223337Brugia malayiFrom_analysisWormBase-Compara
WBGene00237507Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g9188Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4880Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10138Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1590Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17578Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7735Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5531Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21176Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1410Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17720Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19404Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24243Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00186.g6518Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-sup-17Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20539Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01411.g20755Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05079Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002527Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06191Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15811Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10124010Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259523Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293620Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00051257Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00051561Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063439Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065291Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066068Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077875Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metallopeptidase activity. Is an ortholog of C. elegans sup-17. In C. elegans, sup-17 is involved in several processes, including nematode male tail tip morphogenesis; positive regulation of transforming growth factor beta receptor signaling pathway; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29549
Corresponding_transcriptCRE29549.1
Other_sequenceAcan_isotig08167
CRC09697_1
FG581842.1
JI164665.1
RSC02600_1
JI172440.1
FC819468.1
JI165558.1
RS08701
Hbac_isotig05322
SRC05727_1
Dviv_isotig23060
ACC09332_1
DIC00080_1
JI164653.1
EX537548.1
SR03190
BXC07560_1
EY471988.1
CBC00192_1
HBC08024_1
CR05709
JO470837.1
DI00321
ES739034.1
JI463193.1
Experimental_infoExpr_patternExpr1104331
Microarray_resultsGPL14146_CRE29549_2118-2177_0.895_16_B
GPL14146_CRE29549_2161-2220_0.918_6_C
GPL14146_CRE29549_2363-2422_0.912_8_A
MethodGene